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Structural insights into the mechanism of the human SGLT2–MAP17 glucose transporter

View ORCID ProfileMasahiro Hiraizumi, View ORCID ProfileTomoya Akashi, Kouta Murasaki, Hiroyuki Kishida, Taichi Kumanomidou, Nao Torimoto, View ORCID ProfileOsamu Nureki, View ORCID ProfileIkuko Miyaguchi
doi: https://doi.org/10.1101/2023.01.23.524988
Masahiro Hiraizumi
1Discovery Technology Laboratories Sohyaku Innovative Research Division, Mitsubishi Tanabe Pharma Co., LTD., 1000, Kamoshida-cho, Aoba-ku, Yokohama 227-0033, Japan
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  • For correspondence: hiraizumi-masahiro4580@g.ecc.u-tokyo.ac.jp
Tomoya Akashi
2DMPK Research Laboratories Sohyaku Innovative Research Division, Mitsubishi Tanabe Pharma Co., LTD., 1000, Kamoshida-cho, Aoba-ku, Yokohama 227-0033, Japan
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Kouta Murasaki
1Discovery Technology Laboratories Sohyaku Innovative Research Division, Mitsubishi Tanabe Pharma Co., LTD., 1000, Kamoshida-cho, Aoba-ku, Yokohama 227-0033, Japan
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Hiroyuki Kishida
1Discovery Technology Laboratories Sohyaku Innovative Research Division, Mitsubishi Tanabe Pharma Co., LTD., 1000, Kamoshida-cho, Aoba-ku, Yokohama 227-0033, Japan
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Taichi Kumanomidou
1Discovery Technology Laboratories Sohyaku Innovative Research Division, Mitsubishi Tanabe Pharma Co., LTD., 1000, Kamoshida-cho, Aoba-ku, Yokohama 227-0033, Japan
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Nao Torimoto
1Discovery Technology Laboratories Sohyaku Innovative Research Division, Mitsubishi Tanabe Pharma Co., LTD., 1000, Kamoshida-cho, Aoba-ku, Yokohama 227-0033, Japan
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Osamu Nureki
3Department of Biological Sciences, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
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  • For correspondence: hiraizumi-masahiro4580@g.ecc.u-tokyo.ac.jp
Ikuko Miyaguchi
1Discovery Technology Laboratories Sohyaku Innovative Research Division, Mitsubishi Tanabe Pharma Co., LTD., 1000, Kamoshida-cho, Aoba-ku, Yokohama 227-0033, Japan
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  • For correspondence: hiraizumi-masahiro4580@g.ecc.u-tokyo.ac.jp
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Abstract

Selective sodium-glucose cotransporter 2 (SGLT2) plays an important role in glucose reabsorption. SGLT2 inhibitors suppress glucose reabsorption from the kidneys, thus reducing blood glucose levels in type 2 diabetes patients. We and other groups have developed several SGLT2 inhibitors starting from a natural product, phlorizin, but their action mechanisms remain unknown. Here, we elucidated the physiological hSGLT2–MAP17 complex structures bound to five SGLT2 inhibitors using single-particle cryo-electron microscopy. Canagliflozin, dapagliflozin, TA-1887, and sotagliflozin were bound in the outward-facing structure, whereas phlorizin was bound in the inward-open structure. The phlorizin–hSGLT2 interaction biochemically exhibited biphasic binding. Phlorizin weakly binds, via the phloretin motif, from its intracellular side near the Na+-binding site, while strongly interacts from its extracellular side. Unexpectedly, bound Na+ stabilizes the outward-open conformation, while its release allows the transporter to adopt inward-open state. Our results first visualized the Na+-binding and inward-open conformation of hSGLT2–MAP17, clarifying the unprecedented Na+-dependent sugar transport mechanism with MAP17 acting as a scaffold, and may pave the way for development of next-generation SGLT inhibitors.

Competing Interest Statement

Masahiro Hiraizumi, Tomoya Akash, Kouta Murasaki, Hiroyuki Kishida, Taichi Kumanomidou, Nao Torimoto, and Ikuko Miyaguchi are employees of Mitsubishi Tanabe Pharma Corporation. Osamu Nureki is a co-founder of, and scientific advisor to, Curreio.

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  • ↵4 Co-first authors

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted January 23, 2023.
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Structural insights into the mechanism of the human SGLT2–MAP17 glucose transporter
Masahiro Hiraizumi, Tomoya Akashi, Kouta Murasaki, Hiroyuki Kishida, Taichi Kumanomidou, Nao Torimoto, Osamu Nureki, Ikuko Miyaguchi
bioRxiv 2023.01.23.524988; doi: https://doi.org/10.1101/2023.01.23.524988
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Structural insights into the mechanism of the human SGLT2–MAP17 glucose transporter
Masahiro Hiraizumi, Tomoya Akashi, Kouta Murasaki, Hiroyuki Kishida, Taichi Kumanomidou, Nao Torimoto, Osamu Nureki, Ikuko Miyaguchi
bioRxiv 2023.01.23.524988; doi: https://doi.org/10.1101/2023.01.23.524988

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