Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire

View ORCID ProfileAgnieszka Winiarska, View ORCID ProfileFidel Ramírez-Amador, View ORCID ProfileDominik Hege, Yvonne Gemmecker, Simone Prinz, View ORCID ProfileGeorg Hochberg, View ORCID ProfileJohann Heider, View ORCID ProfileMaciej Szaleniec, View ORCID ProfileJan Michael Schuller
doi: https://doi.org/10.1101/2023.01.23.525143
Agnieszka Winiarska
1Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Krakow, Poland
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Agnieszka Winiarska
  • For correspondence: jan.schuller@synmikro.uni-marburg.de heider@staff.uni-marburg.de maciej.szaleniec@ikifp.edu.pl agnieszka.winiarsk@ikifp.edu.pl
Fidel Ramírez-Amador
2SYNMIKRO Research Center and Department of Chemistry, University of Marburg, Marburg, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Fidel Ramírez-Amador
Dominik Hege
3Faculty of Biology, Philipps-Universität Marburg, Marburg, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Dominik Hege
Yvonne Gemmecker
3Faculty of Biology, Philipps-Universität Marburg, Marburg, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Simone Prinz
4Max Planck Institute of Biophysics, Frankfurt am Main, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Georg Hochberg
5Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Georg Hochberg
Johann Heider
2SYNMIKRO Research Center and Department of Chemistry, University of Marburg, Marburg, Germany
3Faculty of Biology, Philipps-Universität Marburg, Marburg, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Johann Heider
  • For correspondence: jan.schuller@synmikro.uni-marburg.de heider@staff.uni-marburg.de maciej.szaleniec@ikifp.edu.pl agnieszka.winiarsk@ikifp.edu.pl
Maciej Szaleniec
1Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Krakow, Poland
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Maciej Szaleniec
  • For correspondence: jan.schuller@synmikro.uni-marburg.de heider@staff.uni-marburg.de maciej.szaleniec@ikifp.edu.pl agnieszka.winiarsk@ikifp.edu.pl
Jan Michael Schuller
2SYNMIKRO Research Center and Department of Chemistry, University of Marburg, Marburg, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Jan Michael Schuller
  • For correspondence: jan.schuller@synmikro.uni-marburg.de heider@staff.uni-marburg.de maciej.szaleniec@ikifp.edu.pl agnieszka.winiarsk@ikifp.edu.pl
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

Aldehyde oxidoreductases (AOR) are tungsten enzymes catalysing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium Aromatoleum aromaticum (AORAa) consists of three different subunits (AorABC) and utilizes NAD as electron acceptor. Here we reveal that the enzyme forms filaments of repeating AorAB protomers which are capped by a single NAD-binding AorC subunit, based on solving its structure via cryo-electron microscopy. The polyferredoxin-like subunit AorA oligomerizes to an electron-conducting nanowire that is decorated with enzymatically active and W-cofactor (W-co) containing AorB subunits. Our structure further reveals the binding mode of the native substrate benzoate in the AorB active site. This, together with QM:MM-based modelling for the coordination of the W-co, enables formulation of catalytic mechanism hypothesis that paves the way for further engineering of AOR for applications in synthetic biology and biotechnology.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted January 23, 2023.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
Agnieszka Winiarska, Fidel Ramírez-Amador, Dominik Hege, Yvonne Gemmecker, Simone Prinz, Georg Hochberg, Johann Heider, Maciej Szaleniec, Jan Michael Schuller
bioRxiv 2023.01.23.525143; doi: https://doi.org/10.1101/2023.01.23.525143
Digg logo Reddit logo Twitter logo Facebook logo Google logo LinkedIn logo Mendeley logo
Citation Tools
A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
Agnieszka Winiarska, Fidel Ramírez-Amador, Dominik Hege, Yvonne Gemmecker, Simone Prinz, Georg Hochberg, Johann Heider, Maciej Szaleniec, Jan Michael Schuller
bioRxiv 2023.01.23.525143; doi: https://doi.org/10.1101/2023.01.23.525143

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Biochemistry
Subject Areas
All Articles
  • Animal Behavior and Cognition (4105)
  • Biochemistry (8807)
  • Bioengineering (6508)
  • Bioinformatics (23445)
  • Biophysics (11783)
  • Cancer Biology (9196)
  • Cell Biology (13307)
  • Clinical Trials (138)
  • Developmental Biology (7428)
  • Ecology (11402)
  • Epidemiology (2066)
  • Evolutionary Biology (15141)
  • Genetics (10429)
  • Genomics (14036)
  • Immunology (9167)
  • Microbiology (22142)
  • Molecular Biology (8802)
  • Neuroscience (47531)
  • Paleontology (350)
  • Pathology (1427)
  • Pharmacology and Toxicology (2489)
  • Physiology (3729)
  • Plant Biology (8076)
  • Scientific Communication and Education (1437)
  • Synthetic Biology (2220)
  • Systems Biology (6036)
  • Zoology (1252)