Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype

Rebecca L. Schmitz, Kelsey E. Tweed, Peter Rehani, Kayvan Samimi, Jeremiah Riendeau, Isabel Jones, Elizabeth M. Maly, Emmanuel Contreras Guzman, Matthew H. Forsberg, Ankita Shahi, View ORCID ProfileChristian M. Capitini, View ORCID ProfileAlex J. Walsh, View ORCID ProfileMelissa C. Skala
doi: https://doi.org/10.1101/2023.01.23.525260
Rebecca L. Schmitz
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Kelsey E. Tweed
1Morgridge Institute for Research, Madison, WI, USA
2Department of Biomedical Engineering, University of Wisconsin, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Peter Rehani
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Kayvan Samimi
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Jeremiah Riendeau
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Isabel Jones
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Elizabeth M. Maly
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Emmanuel Contreras Guzman
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Matthew H. Forsberg
3Department of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Ankita Shahi
3Department of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Christian M. Capitini
3Department of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA
4Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Christian M. Capitini
Alex J. Walsh
1Morgridge Institute for Research, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Alex J. Walsh
Melissa C. Skala
1Morgridge Institute for Research, Madison, WI, USA
2Department of Biomedical Engineering, University of Wisconsin, Madison, WI, USA
4Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Melissa C. Skala
  • For correspondence: mcskala@wisc.edu
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Data/Code
  • Preview PDF
Loading

Abstract

New non-destructive tools are needed to reliably assess lymphocyte function for immune profiling and adoptive cell therapy. Optical metabolic imaging (OMI) is a label-free method that measures the autofluorescence intensity and lifetime of metabolic cofactors NAD(P)H and FAD to quantify metabolism at a single-cell level. Here, we investigate whether OMI can resolve metabolic changes between human quiescent versus IL4/CD40 activated B cells and IL12/IL15/IL18 activated memory-like NK cells. We found that quiescent B and NK cells were more oxidized compared to activated cells. Additionally, the NAD(P)H mean fluorescence lifetime decreased and the fraction of unbound NAD(P)H increased in the activated B and NK cells compared to quiescent cells. Machine learning classified B cells and NK cells according to activation state (CD69+) based on OMI parameters with up to 93.4% and 92.6% accuracy, respectively. Leveraging our previously published OMI data from activated and quiescent T cells, we found that the NAD(P)H mean fluorescence lifetime increased in NK cells compared to T cells, and further increased in B cells compared to NK cells. Random forest models based on OMI classified lymphocytes according to subtype (B, NK, T cell) with 97.8% accuracy, and according to activation state (quiescent or activated) and subtype (B, NK, T cell) with 90.0% accuracy. Our results show that autofluorescence lifetime imaging can accurately assess lymphocyte activation and subtype in a label-free, non-destructive manner.

Teaser Label-free optical imaging can assess the metabolic state of lymphocytes on a single-cell level in a touch-free system.

Competing Interest Statement

RLS, KS, ECG, AJW, and MCS are inventors on patent applications related to this work filed by Wisconsin Alumni Research Foundation (WO2020047133A1, filed on 2019-08-28; US20210049346A1, filed on 2020-08-13; US20210354143A1, filed on 2021-05-17). CMC receives honorarium for advisory board membership with Bayer, Elephas Bio, Nektar Therapeutics, Novartis and WiCell, who had no input in the study design, analysis, manuscript preparation or decision to submit for publication. All other authors declare they have no competing interests.

Footnotes

  • https://github.com/skalalab/schmitz_r-lymphocyte_activation

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted January 23, 2023.
Download PDF
Data/Code
Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype
Rebecca L. Schmitz, Kelsey E. Tweed, Peter Rehani, Kayvan Samimi, Jeremiah Riendeau, Isabel Jones, Elizabeth M. Maly, Emmanuel Contreras Guzman, Matthew H. Forsberg, Ankita Shahi, Christian M. Capitini, Alex J. Walsh, Melissa C. Skala
bioRxiv 2023.01.23.525260; doi: https://doi.org/10.1101/2023.01.23.525260
Digg logo Reddit logo Twitter logo Facebook logo Google logo LinkedIn logo Mendeley logo
Citation Tools
Autofluorescence lifetime imaging classifies human lymphocyte activation and subtype
Rebecca L. Schmitz, Kelsey E. Tweed, Peter Rehani, Kayvan Samimi, Jeremiah Riendeau, Isabel Jones, Elizabeth M. Maly, Emmanuel Contreras Guzman, Matthew H. Forsberg, Ankita Shahi, Christian M. Capitini, Alex J. Walsh, Melissa C. Skala
bioRxiv 2023.01.23.525260; doi: https://doi.org/10.1101/2023.01.23.525260

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Bioengineering
Subject Areas
All Articles
  • Animal Behavior and Cognition (4104)
  • Biochemistry (8807)
  • Bioengineering (6508)
  • Bioinformatics (23442)
  • Biophysics (11782)
  • Cancer Biology (9195)
  • Cell Biology (13307)
  • Clinical Trials (138)
  • Developmental Biology (7428)
  • Ecology (11402)
  • Epidemiology (2066)
  • Evolutionary Biology (15140)
  • Genetics (10429)
  • Genomics (14036)
  • Immunology (9166)
  • Microbiology (22142)
  • Molecular Biology (8802)
  • Neuroscience (47528)
  • Paleontology (350)
  • Pathology (1427)
  • Pharmacology and Toxicology (2489)
  • Physiology (3729)
  • Plant Biology (8076)
  • Scientific Communication and Education (1437)
  • Synthetic Biology (2220)
  • Systems Biology (6035)
  • Zoology (1252)