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Ribonucleotide Reductase Subunit Switching in Hepatoblastoma Drug Response and Relapse

Anthony Brown, Qingfei Pan, Li Fan, Emilie Indersie, Cheng Tian, Nikolai Timchenko, Liyuan Li, Baranda S. Hansen, Haiyan Tan, Meifen Lu, Junmin Peng, Shondra M. Pruett-Miller, View ORCID ProfileJiyang Yu, Stefano Cairo, View ORCID ProfileLiqin Zhu
doi: https://doi.org/10.1101/2023.01.24.525404
Anthony Brown
1Department of Pharmacy and Pharmaceutical Sciences, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Qingfei Pan
2Department of Computational Biology, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Li Fan
1Department of Pharmacy and Pharmaceutical Sciences, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Emilie Indersie
3XenTech, France
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Cheng Tian
1Department of Pharmacy and Pharmaceutical Sciences, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Nikolai Timchenko
4Department of Surgery, Cincinnati Children’s Hospital Medical Center and Department of Surgery, University of Cincinnati, Cincinnati, Ohio, United States
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Liyuan Li
1Department of Pharmacy and Pharmaceutical Sciences, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Baranda S. Hansen
6Center for Proteomics and Metabolomics, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Haiyan Tan
6Center for Proteomics and Metabolomics, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Meifen Lu
7Center for Comparative Pathology Core, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Junmin Peng
8Departments of Structural Biology and Developmental Neurobiology, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Shondra M. Pruett-Miller
5Department of Cell and Molecular Biology and Center for Advanced Genome Engineering, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Jiyang Yu
2Department of Computational Biology, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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Stefano Cairo
3XenTech, France
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Liqin Zhu
1Department of Pharmacy and Pharmaceutical Sciences, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
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  • ORCID record for Liqin Zhu
  • For correspondence: liqin.zhu@stjude.org
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ABSTRACT

Prognosis of children with high-risk hepatoblastoma (HB), the most common pediatric liver cancer, remains poor. In this study, we found ribonucleotide reductase (RNR) subunit M2 (RRM2) was one of the key genes supporting cell proliferation in high-risk HB. While standard chemotherapies could effectively suppress RRM2 in HB cells, they induced a significant upregulation of the other RNR M2 subunit, RRM2B. Computational analysis revealed distinct signaling networks RRM2 and RRM2B were involved in HB patient tumors, with RRM2 supporting cell proliferation and RRM2B participating heavily in stress response pathways. Indeed, RRM2B upregulation in chemotherapy-treated HB cells promoted cell survival and subsequent relapse, during which RRM2B was gradually replaced back by RRM2. Combining an RRM2 inhibitor with chemotherapy showed an effective delaying of HB tumor relapse in vivo. Overall, our study revealed the distinct roles of the two RNR M2 subunits and their dynamic switching during HB cell proliferation and stress response.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Conflict of interest statement: The authors have declared that no conflict of interest exists.

  • Grant Support: NIH/NCI R21CA256464

  • Competing Interest: The authors have declared no conflict of interest.

  • ABBREVIATIONS

    HB
    hepatoblastoma
    HCC
    hepatocellular carcinoma
    PDX
    patient-derived xenografts
    RNR
    ribonucleotide reductase
    RRM1
    ribonucleotide reductase subunit M1
    RRM2
    ribonucleotide reductase subunit M2
    RRM2B
    ribonucleotide reductase subunit M2B
    NICD
    Notch intercellular domain
    PNR
    Prominin1CreERT2; RosaNICD1/+; RosaZsG
    PPTR
    Prominin1CreERT2; Ptenflx/flx; Tp53flx/flx; RosaZsG
    tdT
    tdTomato
    NSG
    nod skid gamma
    TCGA
    The cancer genome atlas
    GSEA
    gene set enrichment analysis
    PYWAYRRM2
    ribonucleotide reductase subunit M2 associated pathways
    PYWAYRRM2B
    ribonucleotide reductase subunit M2B associated pathways
  • Copyright 
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    Posted January 24, 2023.
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    Ribonucleotide Reductase Subunit Switching in Hepatoblastoma Drug Response and Relapse
    Anthony Brown, Qingfei Pan, Li Fan, Emilie Indersie, Cheng Tian, Nikolai Timchenko, Liyuan Li, Baranda S. Hansen, Haiyan Tan, Meifen Lu, Junmin Peng, Shondra M. Pruett-Miller, Jiyang Yu, Stefano Cairo, Liqin Zhu
    bioRxiv 2023.01.24.525404; doi: https://doi.org/10.1101/2023.01.24.525404
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    Ribonucleotide Reductase Subunit Switching in Hepatoblastoma Drug Response and Relapse
    Anthony Brown, Qingfei Pan, Li Fan, Emilie Indersie, Cheng Tian, Nikolai Timchenko, Liyuan Li, Baranda S. Hansen, Haiyan Tan, Meifen Lu, Junmin Peng, Shondra M. Pruett-Miller, Jiyang Yu, Stefano Cairo, Liqin Zhu
    bioRxiv 2023.01.24.525404; doi: https://doi.org/10.1101/2023.01.24.525404

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