New Results

Themisto: a scalable colored k-mer index for sensitive pseudoalignment against hundreds of thousands of bacterial genomes

Jarno N. Alanko, Jaakko Vuohtoniemi, Tommi Mäklin, Simon J. Puglisi
doi: https://doi.org/10.1101/2023.02.24.529942

Article Information

doi 
https://doi.org/10.1101/2023.02.24.529942
History 
  • February 24, 2023.

Article Versions

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.

Author Information

  1. Jarno N. Alanko1,*,
  2. Jaakko Vuohtoniemi1,
  3. Tommi Mäklin2 and
  4. Simon J. Puglisi1
  1. 1Department of Computer Science, University of Helsinki, Helsinki, 00014, Finland
  2. 2Department of Mathematics and Statistics, University of Helsinki, Helsinki, 00014, Finland
  1. ↵*To whom correspondence should be addressed. email: alanko.jarno{at}gmail.com
Back to top
Posted February 24, 2023.
Download PDF
Email
Themisto: a scalable colored k-mer index for sensitive pseudoalignment against hundreds of thousands of bacterial genomes
Jarno N. Alanko, Jaakko Vuohtoniemi, Tommi Mäklin, Simon J. Puglisi
bioRxiv 2023.02.24.529942; doi: https://doi.org/10.1101/2023.02.24.529942
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools

Subject Area