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Aging Atlas Reveals Cell-Type-Specific Regulation of Pro-longevity Strategies

View ORCID ProfileShihong Max Gao, View ORCID ProfileYanyan Qi, View ORCID ProfileQinghao Zhang, View ORCID ProfileAaron S. Mohammed, View ORCID ProfileYi-Tang Lee, View ORCID ProfileYouchen Guan, View ORCID ProfileHongjie Li, View ORCID ProfileYusi Fu, View ORCID ProfileMeng C. Wang
doi: https://doi.org/10.1101/2023.02.28.530490
Shihong Max Gao
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
2Program in Developmental Biology, Baylor College of Medicine; Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
4Janelia Research Campus, Howard Hughes Medical Institute; Ashburn, VA 20147, USA
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  • ORCID record for Shihong Max Gao
Yanyan Qi
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
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Qinghao Zhang
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
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Aaron S. Mohammed
5Department of Biomedical Sciences, Creighton University School of Medicine; Omaha, NE 68178, USA
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Yi-Tang Lee
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
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Youchen Guan
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
4Janelia Research Campus, Howard Hughes Medical Institute; Ashburn, VA 20147, USA
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Hongjie Li
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
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  • For correspondence: yusifu@creighton.edu hongjie.li@bcm.edu mengwang@janelia.hhmi.org
Yusi Fu
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
5Department of Biomedical Sciences, Creighton University School of Medicine; Omaha, NE 68178, USA
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  • For correspondence: yusifu@creighton.edu hongjie.li@bcm.edu mengwang@janelia.hhmi.org
Meng C. Wang
1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
2Program in Developmental Biology, Baylor College of Medicine; Houston, TX 77030, USA
3Huffington Center on Aging, Baylor College of Medicine; Houston, TX 77030, USA
4Janelia Research Campus, Howard Hughes Medical Institute; Ashburn, VA 20147, USA
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  • For correspondence: yusifu@creighton.edu hongjie.li@bcm.edu mengwang@janelia.hhmi.org
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Abstract

Organism aging occurs at the multicellular level; however, how pro-longevity mechanisms slow down aging in different cell types remains unclear. We generated single-cell transcriptomic atlases across the lifespan of Caenorhabditis elegans under different pro-longevity conditions (http://mengwanglab.org/atlas). We found cell-specific, age-related changes across somatic and germ cell types and developed transcriptomic aging clocks for different tissues. These clocks enabled us to determine tissue-specific aging-slowing effects of different pro-longevity mechanisms, and identify major cell types sensitive to these regulations. Additionally, we provided a systemic view of alternative polyadenylation events in different cell types, as well as their cell-type-specific changes during aging and under different pro-longevity conditions. Together, this study provides molecular insights into how aging occurs in different cell types and how they respond to pro-longevity strategies.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Changed several typos in the author institution list.

  • http://mengwanglab.org/atlas

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted March 02, 2023.
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Aging Atlas Reveals Cell-Type-Specific Regulation of Pro-longevity Strategies
Shihong Max Gao, Yanyan Qi, Qinghao Zhang, Aaron S. Mohammed, Yi-Tang Lee, Youchen Guan, Hongjie Li, Yusi Fu, Meng C. Wang
bioRxiv 2023.02.28.530490; doi: https://doi.org/10.1101/2023.02.28.530490
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Aging Atlas Reveals Cell-Type-Specific Regulation of Pro-longevity Strategies
Shihong Max Gao, Yanyan Qi, Qinghao Zhang, Aaron S. Mohammed, Yi-Tang Lee, Youchen Guan, Hongjie Li, Yusi Fu, Meng C. Wang
bioRxiv 2023.02.28.530490; doi: https://doi.org/10.1101/2023.02.28.530490

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