Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor

Jing Zhang, Zefan Li, Yu Pang, Yichong Fan, View ORCID ProfileHui-wang Ai
doi: https://doi.org/10.1101/2023.03.01.530644
Jing Zhang
1Department of Molecular Physiology and Biological Physics, University of Virginia School of Medicine, 1340 Jefferson Park Ave, Charlottesville, Virginia, 22908, USA
2Center for Membrane and Cell Physiology, University of Virginia School of Medicine, Charlottesville, Virginia, 22908, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Zefan Li
1Department of Molecular Physiology and Biological Physics, University of Virginia School of Medicine, 1340 Jefferson Park Ave, Charlottesville, Virginia, 22908, USA
2Center for Membrane and Cell Physiology, University of Virginia School of Medicine, Charlottesville, Virginia, 22908, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Yu Pang
2Center for Membrane and Cell Physiology, University of Virginia School of Medicine, Charlottesville, Virginia, 22908, USA
3Department of Chemistry, University of Virginia, Charlottesville, Virginia, 22904, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Yichong Fan
1Department of Molecular Physiology and Biological Physics, University of Virginia School of Medicine, 1340 Jefferson Park Ave, Charlottesville, Virginia, 22908, USA
2Center for Membrane and Cell Physiology, University of Virginia School of Medicine, Charlottesville, Virginia, 22908, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Hui-wang Ai
1Department of Molecular Physiology and Biological Physics, University of Virginia School of Medicine, 1340 Jefferson Park Ave, Charlottesville, Virginia, 22908, USA
2Center for Membrane and Cell Physiology, University of Virginia School of Medicine, Charlottesville, Virginia, 22908, USA
3Department of Chemistry, University of Virginia, Charlottesville, Virginia, 22904, USA
4UVA Comprehensive Cancer Center, University of Virginia, Charlottesville, Virginia, 22903, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Hui-wang Ai
  • For correspondence: huiwang.ai@virginia.edu
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

ABSTRACT

There is great interest in developing boronolectins, which are synthetic lectin mimics containing a boronic acid functional group for reversible recognition of diol-containing molecules, such as glycans and ribonucleotides. However, it remains a significant challenge to gain specificity. Here, we present a genetically encoded boronolectin, which is a hybrid protein consisting of a noncanonical amino acid (ncAA) p-boronophenylalanine (pBoF), natural-lectin-derived peptide sequences, and a circularly permuted red fluorescent protein (cpRFP). The genetic encodability permitted a straightforward protein engineering process to derive a red fluorescent biosensor that can specifically bind uridine diphosphate N-acetylglucosamine (UDP-GlcNAc), an important nucleotide sugar involved in metabolic sensing and cell signaling. We further characterized the resultant boronic acid-and peptide-assisted UDP-GlcNAc sensor (bapaUGAc) both in vitro and in live mammalian cells. Because UDP-GlcNAc in the endoplasmic reticulum (ER) and Golgi apparatus plays essential roles in glycosylating biomolecules in the secretory pathway, we genetically expressed bapaUGAc in the ER and Golgi and validated the sensor for its responses to metabolic disruption and pharmacological inhibition. In addition, we combined bapaUGAc with UGAcS, a recently reported green fluorescent UDP-GlcNAc sensor based on an alternative sensing mechanism, to monitor UDP-GlcNAc level changes in the ER and cytosol simultaneously. We expect our work to facilitate the future development of specific boronolectins for carbohydrates. In addition, this newly developed genetically encoded bapaUGAc sensor will be a valuable tool for studying UDP-GlcNAc and glycobiology.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted March 01, 2023.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor
Jing Zhang, Zefan Li, Yu Pang, Yichong Fan, Hui-wang Ai
bioRxiv 2023.03.01.530644; doi: https://doi.org/10.1101/2023.03.01.530644
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Genetically Encoded Boronolectin as a Specific Red Fluorescent UDP-GlcNAc Biosensor
Jing Zhang, Zefan Li, Yu Pang, Yichong Fan, Hui-wang Ai
bioRxiv 2023.03.01.530644; doi: https://doi.org/10.1101/2023.03.01.530644

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Biochemistry
Subject Areas
All Articles
  • Animal Behavior and Cognition (4370)
  • Biochemistry (9556)
  • Bioengineering (7071)
  • Bioinformatics (24788)
  • Biophysics (12575)
  • Cancer Biology (9927)
  • Cell Biology (14304)
  • Clinical Trials (138)
  • Developmental Biology (7934)
  • Ecology (12084)
  • Epidemiology (2067)
  • Evolutionary Biology (15962)
  • Genetics (10906)
  • Genomics (14713)
  • Immunology (9848)
  • Microbiology (23592)
  • Molecular Biology (9460)
  • Neuroscience (50727)
  • Paleontology (369)
  • Pathology (1536)
  • Pharmacology and Toxicology (2675)
  • Physiology (4001)
  • Plant Biology (8645)
  • Scientific Communication and Education (1505)
  • Synthetic Biology (2388)
  • Systems Biology (6416)
  • Zoology (1345)