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Asymmetric oligomerization state and sequence patterning can tune multiphase condensate miscibility

View ORCID ProfileUshnish Rana, Ke Xu, View ORCID ProfileAmal Narayanan, Mackenzie T. Walls, View ORCID ProfileAthanassios Z. Panagiotopoulos, View ORCID ProfileJosé L. Avalos, View ORCID ProfileClifford P. Brangwynne
doi: https://doi.org/10.1101/2023.03.11.532188
Ushnish Rana
1Department of Chemical and Biological Engineering, Princeton University, Princeton NJ USA
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Ke Xu
1Department of Chemical and Biological Engineering, Princeton University, Princeton NJ USA
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Amal Narayanan
1Department of Chemical and Biological Engineering, Princeton University, Princeton NJ USA
3Howard Hughes Medical Institute
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Mackenzie T. Walls
1Department of Chemical and Biological Engineering, Princeton University, Princeton NJ USA
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Athanassios Z. Panagiotopoulos
1Department of Chemical and Biological Engineering, Princeton University, Princeton NJ USA
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José L. Avalos
1Department of Chemical and Biological Engineering, Princeton University, Princeton NJ USA
2Andlinger Center for Energy and the Environment, Princeton University, Princeton NJ USA
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  • For correspondence: cbrangwy@princeton.edu javalos@princeton.edu
Clifford P. Brangwynne
1Department of Chemical and Biological Engineering, Princeton University, Princeton NJ USA
3Howard Hughes Medical Institute
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  • ORCID record for Clifford P. Brangwynne
  • For correspondence: cbrangwy@princeton.edu javalos@princeton.edu
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Abstract

Endogenous biomolecular condensates, comprised of a multitude of proteins and RNAs, can organize into multiphasic structures, with compositionally-distinct phases. This multiphasic organization is generally understood to be critical for facilitating their proper biological function. However, the biophysical principles driving multiphase formation are not completely understood. Here, we utilize in vivo condensate reconstitution experiments and coarse-grained molecular simulations to investigate how oligomerization and sequence interactions modulate multiphase organization in biomolecular condensates. We demonstrate that increasing the oligomerization state of an intrinsically disordered protein region (IDR) results in enhanced immiscibility and multiphase formation. Interestingly, we found that oligomerization tunes the miscibility of IDRs in an asymmetric manner, with the effect being more pronounced when the IDR exhibiting stronger homotypic IDR interactions is oligomerized. Our findings suggest that oligomerization is a flexible biophysical mechanism which cells can exploit to tune the internal organization of biomolecular condensates and their associated biological functions.

Competing Interest Statement

C.P.B. is a founder of and consultant for Nereid Therapeutics. All other authors declare no competing interests.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted March 12, 2023.
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Asymmetric oligomerization state and sequence patterning can tune multiphase condensate miscibility
Ushnish Rana, Ke Xu, Amal Narayanan, Mackenzie T. Walls, Athanassios Z. Panagiotopoulos, José L. Avalos, Clifford P. Brangwynne
bioRxiv 2023.03.11.532188; doi: https://doi.org/10.1101/2023.03.11.532188
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Asymmetric oligomerization state and sequence patterning can tune multiphase condensate miscibility
Ushnish Rana, Ke Xu, Amal Narayanan, Mackenzie T. Walls, Athanassios Z. Panagiotopoulos, José L. Avalos, Clifford P. Brangwynne
bioRxiv 2023.03.11.532188; doi: https://doi.org/10.1101/2023.03.11.532188

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