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Cross-species single-cell comparison of systemic and cardiac inflammatory responses after cardiac injury

Eric Cortada, Jun Yao, Yu Xia, Friederike Dündar, Paul Zumbo, Boris Yang, Alfonso Rubio-Navarro, Björn Perder, Miaoyan Qiu, Anthony M. Pettinato, Edwin A. Homan, Lisa Stoll, Doron Betel, View ORCID ProfileJingli Cao, View ORCID ProfileJames C. Lo
doi: https://doi.org/10.1101/2023.03.15.532865
Eric Cortada
1Weill Center for Metabolic Health, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
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Jun Yao
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
3Department of Cell and Developmental Biology, Weill Cornell Medicine, New York, NY, USA
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Yu Xia
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
3Department of Cell and Developmental Biology, Weill Cornell Medicine, New York, NY, USA
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Friederike Dündar
4Applied Bioinformatics Core, Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA
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Paul Zumbo
4Applied Bioinformatics Core, Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA
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Boris Yang
1Weill Center for Metabolic Health, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
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Alfonso Rubio-Navarro
1Weill Center for Metabolic Health, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
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Björn Perder
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
3Department of Cell and Developmental Biology, Weill Cornell Medicine, New York, NY, USA
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Miaoyan Qiu
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
3Department of Cell and Developmental Biology, Weill Cornell Medicine, New York, NY, USA
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Anthony M. Pettinato
1Weill Center for Metabolic Health, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
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Edwin A. Homan
1Weill Center for Metabolic Health, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
5Division of Cardiology, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
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Lisa Stoll
1Weill Center for Metabolic Health, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
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Doron Betel
4Applied Bioinformatics Core, Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA
6Institute for Computational Biomedicine, Division of Hematology and Medical Oncology, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
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  • For correspondence: dob2014@med.cornell.edu jic4001@med.cornell.edu jlo@med.cornell.edu
Jingli Cao
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
3Department of Cell and Developmental Biology, Weill Cornell Medicine, New York, NY, USA
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  • ORCID record for Jingli Cao
  • For correspondence: dob2014@med.cornell.edu jic4001@med.cornell.edu jlo@med.cornell.edu
James C. Lo
1Weill Center for Metabolic Health, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
2Cardiovascular Research Institute, Weill Cornell Medicine, New York, NY, USA
5Division of Cardiology, Department of Medicine, Weill Cornell Medicine, New York, NY, USA
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  • ORCID record for James C. Lo
  • For correspondence: dob2014@med.cornell.edu jic4001@med.cornell.edu jlo@med.cornell.edu
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Abstract

The immune system coordinates the response to cardiac injury and is known to control regenerative and fibrotic scar outcomes in the heart and subsequent chronic low-grade inflammation associated with heart failure. Here we profiled the inflammatory response to heart injury using single cell transcriptomics to compare and contrast two experimental models with disparate outcomes. We used adult mice, which like humans lack the ability to fully recover and zebrafish which spontaneously regenerate after heart injury. The extracardiac reaction to cardiomyocyte necrosis was also interrogated to assess the specific peripheral tissue and immune cell reaction to chronic stress. Cardiac macrophages are known to play a critical role in determining tissue homeostasis by healing versus scarring. We identified distinct transcriptional clusters of monocytes/macrophages in each species and found analogous pairs in zebrafish and mice. However, the reaction to myocardial injury was largely disparate between mice and zebrafish. The dichotomous response to heart damage between the mammalian and zebrafish monocytes/macrophages may underlie the impaired regenerative process in mice, representing a future therapeutic target.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted March 16, 2023.
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Cross-species single-cell comparison of systemic and cardiac inflammatory responses after cardiac injury
Eric Cortada, Jun Yao, Yu Xia, Friederike Dündar, Paul Zumbo, Boris Yang, Alfonso Rubio-Navarro, Björn Perder, Miaoyan Qiu, Anthony M. Pettinato, Edwin A. Homan, Lisa Stoll, Doron Betel, Jingli Cao, James C. Lo
bioRxiv 2023.03.15.532865; doi: https://doi.org/10.1101/2023.03.15.532865
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Cross-species single-cell comparison of systemic and cardiac inflammatory responses after cardiac injury
Eric Cortada, Jun Yao, Yu Xia, Friederike Dündar, Paul Zumbo, Boris Yang, Alfonso Rubio-Navarro, Björn Perder, Miaoyan Qiu, Anthony M. Pettinato, Edwin A. Homan, Lisa Stoll, Doron Betel, Jingli Cao, James C. Lo
bioRxiv 2023.03.15.532865; doi: https://doi.org/10.1101/2023.03.15.532865

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