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Molecular profiling of high-level athlete skeletal muscle after acute exercise – a systems biology approach

View ORCID ProfileStefan M Reitzner, View ORCID ProfileEric B Emanuelsson, View ORCID ProfileMuhammad Arif, View ORCID ProfileBogumil Kaczkowski, View ORCID ProfileAndrew TJ Kwon, View ORCID ProfileAdil Mardinoglu, View ORCID ProfileErik Arner, View ORCID ProfileMark A. Chapman, View ORCID ProfileCarl Johan Sundberg
doi: https://doi.org/10.1101/2023.04.11.535671
Stefan M Reitzner
1Department of Physiology and Pharmacology, Karolinska Institutet, Stockholm, Sweden
2Deparment for Women’s and Children’s Health, Karolinska Institutet, Stockholm, Sweden
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  • For correspondence: stefan.reitzner@ki.se
Eric B Emanuelsson
1Department of Physiology and Pharmacology, Karolinska Institutet, Stockholm, Sweden
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Muhammad Arif
3Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden
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Bogumil Kaczkowski
4Center for Integrative Medical Sciences, RIKEN Yokohama, Japan
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Andrew TJ Kwon
4Center for Integrative Medical Sciences, RIKEN Yokohama, Japan
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Adil Mardinoglu
3Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden
5Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, United Kingdom
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Erik Arner
4Center for Integrative Medical Sciences, RIKEN Yokohama, Japan
6Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, Japan
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Mark A. Chapman
1Department of Physiology and Pharmacology, Karolinska Institutet, Stockholm, Sweden
7Department of Integrated Engineering, University of San Diego, USA
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Carl Johan Sundberg
1Department of Physiology and Pharmacology, Karolinska Institutet, Stockholm, Sweden
8Department of Learning, Informatics, Management and Ethics, Karolinska Institutet, Stockholm, Sweden
9Department of Laboratory Medicine, Karolinska Institutet, Huddinge, Sweden
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SUMMARY

Life-long high-level exercise training leads to improvements in physical performance and multi-tissue adaptation following changes in molecular pathways. While skeletal muscle baseline differences between exercise-trained and untrained individuals have been previously investigated, it remains unclear how acute exercise multi-omics are influenced by training history. We recruited and extensively characterized 24 individuals categorized as endurance athletes, strength athletes or control subjects. Multi-omics profiling was performed from skeletal muscle before and at three time-points after endurance or resistance exercise sessions. Timeseries multi-omics analysis revealed distinct differences in molecular processes such as fatty- and amino acid metabolism and for transcription factors such as HIF1A and the MYF-family between both exercise history and acute form of exercise. Furthermore, we found a “transcriptional specialization effect” by transcriptional narrowing and intensification. Finally, we performed multi-omics network analysis and clustering, providing a novel resource of skeletal muscle transcriptomic and metabolomic profiling in highly trained and untrained individuals.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted April 11, 2023.
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Molecular profiling of high-level athlete skeletal muscle after acute exercise – a systems biology approach
Stefan M Reitzner, Eric B Emanuelsson, Muhammad Arif, Bogumil Kaczkowski, Andrew TJ Kwon, Adil Mardinoglu, Erik Arner, Mark A. Chapman, Carl Johan Sundberg
bioRxiv 2023.04.11.535671; doi: https://doi.org/10.1101/2023.04.11.535671
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Molecular profiling of high-level athlete skeletal muscle after acute exercise – a systems biology approach
Stefan M Reitzner, Eric B Emanuelsson, Muhammad Arif, Bogumil Kaczkowski, Andrew TJ Kwon, Adil Mardinoglu, Erik Arner, Mark A. Chapman, Carl Johan Sundberg
bioRxiv 2023.04.11.535671; doi: https://doi.org/10.1101/2023.04.11.535671

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