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Spatial enrichment of the type 1 interferon signature in the brain of a neuropsychiatric lupus murine model

Ernest Aw, View ORCID ProfileStacie L. Lin, Yingying Zhang, Uli Herrmann, Esra Yalcin, Kent Langston, Carlos Castrillion, Minghe Ma, Jeffrey R. Moffitt, Michael C. Carroll
doi: https://doi.org/10.1101/2023.04.21.537814
Ernest Aw
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
bDivision of Medical Sciences, Harvard Medical School, Boston, MA, United States
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Stacie L. Lin
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
bDivision of Medical Sciences, Harvard Medical School, Boston, MA, United States
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  • ORCID record for Stacie L. Lin
Yingying Zhang
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
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Uli Herrmann
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
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Esra Yalcin
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
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Kent Langston
cDepartment of Immunology, Harvard Medical School and Evergrande Center for Immunologic Diseases, Harvard Medical School and Brigham and Women’s Hospital, Boston, MA, USA
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Carlos Castrillion
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
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Minghe Ma
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
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Jeffrey R. Moffitt
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
dDepartment of Microbiology, Harvard Medical School, Boston, MA, USA
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Michael C. Carroll
aProgram in Cellular and Molecular Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, United States
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  • For correspondence: michael.carroll@childrens.harvard.edu
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Abstract

Among systemic lupus erythematosus (SLE) patients, neuropsychiatric symptoms are highly prevalent, being observed in up to 80% of adult and 95% of pediatric patients. Type 1 interferons, particularly interferon alpha (IFNα), have been implicated in the pathogenesis of SLE and its associated neuropsychiatric symptoms (NPSLE). However, it remains unclear how type 1 interferon signaling in the central nervous system (CNS) might result in neuropsychiatric sequelae. In this study, we validate an NPSLE mouse model and find an elevated peripheral type 1 interferon signature alongside clinically relevant NPSLE symptoms such as anxiety and fatigue. Unbiased single-nucleus sequencing of the hindbrain and hippocampus revealed that interferon-stimulated genes (ISGs) were among the most highly upregulated genes in both regions and that gene pathways involved in cellular interaction and neuronal development were generally repressed among astrocytes, oligodendrocytes, and neurons. Using image-based spatial transcriptomics, we found that the type 1 interferon signature is enriched as spatially distinct patches within the brain parenchyma of these mice. Our results suggest that type 1 interferon in the CNS may play an important mechanistic role in mediating NPSLE behavioral phenotypes by repressing general cellular communication pathways, and that type 1 interferon signaling modulators are a potential therapeutic option for NPSLE.

  • Mouse model exhibits neuropsychiatric behaviors and elevated type 1 interferon.

  • The type 1 interferon gene signature is predominantly upregulated in the brain.

  • Interferon-stimulated genes (ISGs) are present in a spatial pattern in the brain.

  • Cellular and synaptic interactions are generally repressed in cells with high ISGs.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted April 21, 2023.
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Spatial enrichment of the type 1 interferon signature in the brain of a neuropsychiatric lupus murine model
Ernest Aw, Stacie L. Lin, Yingying Zhang, Uli Herrmann, Esra Yalcin, Kent Langston, Carlos Castrillion, Minghe Ma, Jeffrey R. Moffitt, Michael C. Carroll
bioRxiv 2023.04.21.537814; doi: https://doi.org/10.1101/2023.04.21.537814
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Spatial enrichment of the type 1 interferon signature in the brain of a neuropsychiatric lupus murine model
Ernest Aw, Stacie L. Lin, Yingying Zhang, Uli Herrmann, Esra Yalcin, Kent Langston, Carlos Castrillion, Minghe Ma, Jeffrey R. Moffitt, Michael C. Carroll
bioRxiv 2023.04.21.537814; doi: https://doi.org/10.1101/2023.04.21.537814

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