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Structural basis of TRPV1 modulation by endogenous bioactive lipids

William R. Arnold, Adamo Mancino, Frank R. Moss III, Adam Frost, David Julius, Yifan Cheng
doi: https://doi.org/10.1101/2023.05.11.540281
William R. Arnold
1Department of Biochemistry and Biophysics, University of California San Francisco, 600 16th St. San Francisco, CA, 94158
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Adamo Mancino
1Department of Biochemistry and Biophysics, University of California San Francisco, 600 16th St. San Francisco, CA, 94158
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Frank R. Moss III
1Department of Biochemistry and Biophysics, University of California San Francisco, 600 16th St. San Francisco, CA, 94158
4Chan Zuckerberg Biohub, San Francisco, CA 94158
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Adam Frost
1Department of Biochemistry and Biophysics, University of California San Francisco, 600 16th St. San Francisco, CA, 94158
4Chan Zuckerberg Biohub, San Francisco, CA 94158
5Altos Labs, Redwood City, CA 94065
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David Julius
2Department of Physiology, University of California San Francisco, 600 16th St. San Francisco, CA, 94158
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  • For correspondence: [email protected] [email protected]
Yifan Cheng
1Department of Biochemistry and Biophysics, University of California San Francisco, 600 16th St. San Francisco, CA, 94158
3Howard Hughes Medical Institute, University of California San Francisco, San Francisco, CA 94158
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  • For correspondence: [email protected] [email protected]
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Abstract

TRP ion channels are modulated by phosphoinositide lipids, but the underlying structural mechanisms remain unclear. The capsaicin- and heat-activated receptor, TRPV1, has served as a model for deciphering lipid modulation, which is relevant to understanding how pro-algesic agents enhance channel activity in the setting of inflammatory pain. Identification of a pocket within the TRPV1 transmembrane core has provided initial clues as to how phosphoinositide lipids bind to and regulate the channel. Here we show that this regulatory pocket can accommodate diverse lipid species, including the inflammatory lipid lysophosphatidic acid (LPA), whose actions are determined by their specific modes of binding. Furthermore, we show that an ‘empty pocket’ channel lacking an endogenous phosphoinositide lipid assumes an agonist-like state, even at low temperature, substantiating the concept that phosphoinositide lipids serve as negative TRPV1 modulators whose ejection from the binding pocket is a critical step towards activation by thermal or chemical stimuli.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Updated and added new data to manuscript

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 19, 2023.
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Structural basis of TRPV1 modulation by endogenous bioactive lipids
William R. Arnold, Adamo Mancino, Frank R. Moss III, Adam Frost, David Julius, Yifan Cheng
bioRxiv 2023.05.11.540281; doi: https://doi.org/10.1101/2023.05.11.540281
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Structural basis of TRPV1 modulation by endogenous bioactive lipids
William R. Arnold, Adamo Mancino, Frank R. Moss III, Adam Frost, David Julius, Yifan Cheng
bioRxiv 2023.05.11.540281; doi: https://doi.org/10.1101/2023.05.11.540281

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