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Identification of ERAD-dependent degrons for the endoplasmic reticulum lumen

Rachel Sharninghausen, Jiwon Hwang, Devon Dennison, View ORCID ProfileRyan D. Baldridge
doi: https://doi.org/10.1101/2023.06.21.546000
Rachel Sharninghausen
1Department of Biological Chemistry, University of Michigan Medical School, 1150 W Medical Center Drive, Ann Arbor, MI 48109, USA
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Jiwon Hwang
1Department of Biological Chemistry, University of Michigan Medical School, 1150 W Medical Center Drive, Ann Arbor, MI 48109, USA
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Devon Dennison
2Cellular and Molecular Biology Program, University of Michigan Medical School, 1150 W Medical Center Drive, Ann Arbor, MI 48109, USA
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Ryan D. Baldridge
1Department of Biological Chemistry, University of Michigan Medical School, 1150 W Medical Center Drive, Ann Arbor, MI 48109, USA
2Cellular and Molecular Biology Program, University of Michigan Medical School, 1150 W Medical Center Drive, Ann Arbor, MI 48109, USA
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  • ORCID record for Ryan D. Baldridge
  • For correspondence: ryanbald@umich.edu
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Summary

Degrons are the minimal features that target proteins for degradation. In most cases, degrons allow recognition by components of the cytosolic ubiquitin proteasome system. Currently, every degron that has been identified only functions within the cytosol. Using Saccharomyces cerevisiae, we identified the first short linear sequences that function as degrons from the endoplasmic reticulum (ER) lumen. We show that when these degrons are transferred to proteins, they facilitate degradation through the ERAD system at the cytosolic proteasome. These degrons enable degradation of both luminal and integral membrane ER proteins, expanding the types of proteins that can be targeted for degradation both in budding yeast and in mammalian tissue culture. This discovery provides a framework to target proteins for degradation from the previously unreachable ER lumen and enables novel therapeutic approaches that exploit the highly-conserved ERAD system.

Competing Interest Statement

R.D.B. and R.S. have filed a provisional patent application covering the use of this technology.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted June 22, 2023.
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Identification of ERAD-dependent degrons for the endoplasmic reticulum lumen
Rachel Sharninghausen, Jiwon Hwang, Devon Dennison, Ryan D. Baldridge
bioRxiv 2023.06.21.546000; doi: https://doi.org/10.1101/2023.06.21.546000
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Identification of ERAD-dependent degrons for the endoplasmic reticulum lumen
Rachel Sharninghausen, Jiwon Hwang, Devon Dennison, Ryan D. Baldridge
bioRxiv 2023.06.21.546000; doi: https://doi.org/10.1101/2023.06.21.546000

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