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Distinct Conformations of Mirabegron Determined by MicroED

View ORCID ProfileJieye Lin, View ORCID ProfileJohan Unge, View ORCID ProfileTamir Gonen
doi: https://doi.org/10.1101/2023.06.28.546957
Jieye Lin
1Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
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Johan Unge
1Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
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Tamir Gonen
1Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
2Department of Physiology, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
3Howard Hughes Medical Institute, University of California, Los Angeles, Los Angeles, California 90095, United States
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  • For correspondence: gonent@janelia.hhmi.org
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Abstract

Mirabegron, commonly known as “Myrbetriq”, has been widely prescribed as a medicine for overactive bladder syndrome for over a decade. However, the structure of the drug and what conformational changes it may undergo upon binding its receptor remain unknown. In this study, we employed microcrystal electron diffraction (MicroED) to reveal its elusive three-dimensional (3D) structure. We find that the drug adopts two distinct conformational states (conformers) within the asymmetric unit. Analysis of hydrogen bonding and packing demonstrated that the hydrophilic groups were embedded within the crystal lattice, resulting in a hydrophobic surface and low water solubility. Structural comparison revealed the presence of trans- and cis-forms in conformers 1 and 2, respectively. Comparison of the structures of Mirabegron alone with that of the drug bound to its receptor,1 the beta 3 adrenergic receptor (β3AR) suggests that the drug undergoes major conformational change to fit in the receptor agonist binding site. This research highlights the efficacy of MicroED in determining the unknown and polymorphic structures of active pharmaceutical ingredients (APIs) directly from powders.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted June 28, 2023.
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Distinct Conformations of Mirabegron Determined by MicroED
Jieye Lin, Johan Unge, Tamir Gonen
bioRxiv 2023.06.28.546957; doi: https://doi.org/10.1101/2023.06.28.546957
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Distinct Conformations of Mirabegron Determined by MicroED
Jieye Lin, Johan Unge, Tamir Gonen
bioRxiv 2023.06.28.546957; doi: https://doi.org/10.1101/2023.06.28.546957

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