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cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data

Dmitry Meleshko, Andrey D. Prjbelski, Mikhail Raiko, Alexandru I. Tomescu, Hagen Tilgner, Iman Hajirasouliha
doi: https://doi.org/10.1101/2023.07.25.550587
Dmitry Meleshko
1Tri-Institutional Computational Biology & Medicine Program, Weill Cornell Medicine of Cornell University, NY, 10021, USA
2Institute for Computational Biomedicine, Department of Physiology and Biophysics, Weill Cornell Medicine, NY, 10021, USA
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  • For correspondence: meleshko.dmitrii@gmail.com
Andrey D. Prjbelski
3Department of Computer Science, University of Helsinki, Finland
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Mikhail Raiko
4Center for Algorithmic Biotechnology, Institute for Translational Biomedicine, St. Petersburg State University, St. Petersburg, Russia, 199004
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Alexandru I. Tomescu
3Department of Computer Science, University of Helsinki, Finland
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Hagen Tilgner
5Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, 10021, USA
6Center for Neurogenetics, Weill Cornell Medicine, New York, NY, USA
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Iman Hajirasouliha
2Institute for Computational Biomedicine, Department of Physiology and Biophysics, Weill Cornell Medicine, NY, 10021, USA
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Article Information

doi 
https://doi.org/10.1101/2023.07.25.550587
History 
  • July 27, 2023.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Dmitry Meleshko1,2,*,
  2. Andrey D. Prjbelski3,
  3. Mikhail Raiko4,
  4. Alexandru I. Tomescu3,
  5. Hagen Tilgner5,6 and
  6. Iman Hajirasouliha2
  1. 1Tri-Institutional Computational Biology & Medicine Program, Weill Cornell Medicine of Cornell University, NY, 10021, USA
  2. 2Institute for Computational Biomedicine, Department of Physiology and Biophysics, Weill Cornell Medicine, NY, 10021, USA
  3. 3Department of Computer Science, University of Helsinki, Finland
  4. 4Center for Algorithmic Biotechnology, Institute for Translational Biomedicine, St. Petersburg State University, St. Petersburg, Russia, 199004
  5. 5Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, 10021, USA
  6. 6Center for Neurogenetics, Weill Cornell Medicine, New York, NY, USA
  7. 7Englander Institute for Precision Medicine, The Meyer Cancer Center, Weill Cornell Medicine, NY, 10021, USA
  1. ↵*To whom correspondence should be addressed. email: meleshko.dmitrii{at}gmail.com
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Posted July 27, 2023.
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cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data
Dmitry Meleshko, Andrey D. Prjbelski, Mikhail Raiko, Alexandru I. Tomescu, Hagen Tilgner, Iman Hajirasouliha
bioRxiv 2023.07.25.550587; doi: https://doi.org/10.1101/2023.07.25.550587
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cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data
Dmitry Meleshko, Andrey D. Prjbelski, Mikhail Raiko, Alexandru I. Tomescu, Hagen Tilgner, Iman Hajirasouliha
bioRxiv 2023.07.25.550587; doi: https://doi.org/10.1101/2023.07.25.550587

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