cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data

Dmitry Meleshko; Andrey D. Prjbelski; Mikhail Raiko; Alexandru I. Tomescu; Hagen Tilgner; Iman Hajirasouliha

doi:10.1101/2023.07.25.550587

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cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data

Dmitry Meleshko, Andrey D. Prjbelski, Mikhail Raiko, Alexandru I. Tomescu, Hagen Tilgner, Iman Hajirasouliha

doi: https://doi.org/10.1101/2023.07.25.550587

Dmitry Meleshko

1Tri-Institutional Computational Biology & Medicine Program, Weill Cornell Medicine of Cornell University, NY, 10021, USA

2Institute for Computational Biomedicine, Department of Physiology and Biophysics, Weill Cornell Medicine, NY, 10021, USA

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For correspondence: meleshko.dmitrii@gmail.com

Andrey D. Prjbelski

3Department of Computer Science, University of Helsinki, Finland

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Mikhail Raiko

4Center for Algorithmic Biotechnology, Institute for Translational Biomedicine, St. Petersburg State University, St. Petersburg, Russia, 199004

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Alexandru I. Tomescu

3Department of Computer Science, University of Helsinki, Finland

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Hagen Tilgner

5Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, 10021, USA

6Center for Neurogenetics, Weill Cornell Medicine, New York, NY, USA

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Iman Hajirasouliha

2Institute for Computational Biomedicine, Department of Physiology and Biophysics, Weill Cornell Medicine, NY, 10021, USA

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cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data

Dmitry Meleshko, Andrey D. Prjbelski, Mikhail Raiko, Alexandru I. Tomescu, Hagen Tilgner, Iman Hajirasouliha

bioRxiv 2023.07.25.550587; doi: https://doi.org/10.1101/2023.07.25.550587

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cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data

Dmitry Meleshko, Andrey D. Prjbelski, Mikhail Raiko, Alexandru I. Tomescu, Hagen Tilgner, Iman Hajirasouliha

bioRxiv 2023.07.25.550587; doi: https://doi.org/10.1101/2023.07.25.550587

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