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Analysis of the Neuron-specific IIS/FOXO Transcriptome in Aged Animals Reveals Regulators of Neuronal and Cognitive Aging

View ORCID ProfileYifei Weng, View ORCID ProfileShiyi Zhou, View ORCID ProfileKatherine Morillo, View ORCID ProfileRachel Kaletsky, Sarah Lin, View ORCID ProfileColeen T. Murphy
doi: https://doi.org/10.1101/2023.07.28.550894
Yifei Weng
1Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA
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Shiyi Zhou
1Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA
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Katherine Morillo
1Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA
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Rachel Kaletsky
1Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA
2Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA
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Sarah Lin
1Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA
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Coleen T. Murphy
1Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA
2Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA
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  • For correspondence: ctmurphy@princeton.edu
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Summary

Cognitive decline is a significant public health concern in our aging society. In this study, we used the model organism C. elegans to investigate the impact of the IIS/FOXO pathway on age-related cognitive decline. The daf-2 Insulin/IGF-1 receptor mutant exhibits a significant extension of learning and memory span with age compared to wild-type worms, an effect that is dependent on the DAF-16 transcription factor. To determine the mechanisms by which aging daf-2 mutants can maintain learning and memory with age while wild-type worms lose neuronal function, we carried out neuron-specific transcriptomic analysis in aged animals. We observed downregulation of neuronal genes and upregulation of transcriptional regulation genes in aging wild-type neurons. By contrast, IIS/FOXO pathway mutants exhibit distinct neuronal transcriptomic alterations in response to cognitive aging, including upregulation of stress response genes and downregulation of specific insulin signaling genes. We tested the roles of significantly transcriptionally-changed genes in regulating cognitive functions, identifying several novel regulators of learning and memory. These findings suggest a potential mechanism for regulating cognitive function with age and offer insights into novel therapeutic targets for age-related cognitive decline.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Supplementary Tables added as indicated.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted July 31, 2023.
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Analysis of the Neuron-specific IIS/FOXO Transcriptome in Aged Animals Reveals Regulators of Neuronal and Cognitive Aging
Yifei Weng, Shiyi Zhou, Katherine Morillo, Rachel Kaletsky, Sarah Lin, Coleen T. Murphy
bioRxiv 2023.07.28.550894; doi: https://doi.org/10.1101/2023.07.28.550894
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Analysis of the Neuron-specific IIS/FOXO Transcriptome in Aged Animals Reveals Regulators of Neuronal and Cognitive Aging
Yifei Weng, Shiyi Zhou, Katherine Morillo, Rachel Kaletsky, Sarah Lin, Coleen T. Murphy
bioRxiv 2023.07.28.550894; doi: https://doi.org/10.1101/2023.07.28.550894

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