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The Neuron-specific IIS/FOXO Transcriptome in Aged Animals Reveals Regulatory Mechanisms of Cognitive Aging

View ORCID ProfileYifei Weng, View ORCID ProfileShiyi Zhou, View ORCID ProfileKatherine Morillo, View ORCID ProfileRachel Kaletsky, Sarah Lin, View ORCID ProfileColeen T. Murphy
doi: https://doi.org/10.1101/2023.07.28.550894
Yifei Weng
1Department of Molecular Biology
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Shiyi Zhou
1Department of Molecular Biology
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Katherine Morillo
1Department of Molecular Biology
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Rachel Kaletsky
1Department of Molecular Biology
2LSI Genomics, Princeton University, Princeton NJ 08544
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Sarah Lin
1Department of Molecular Biology
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Coleen T. Murphy
1Department of Molecular Biology
2LSI Genomics, Princeton University, Princeton NJ 08544
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  • For correspondence: [email protected]
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Abstract

Cognitive decline is a significant health concern in our aging society. Here, we used the model organism C. elegans to investigate the impact of the IIS/FOXO pathway on age-related cognitive decline. The daf-2 Insulin/IGF-1 receptor mutant exhibits a significant extension of learning and memory span with age compared to wild-type worms, an effect that is dependent on the DAF-16 transcription factor. To identify possible mechanisms by which aging daf-2 mutants maintain learning and memory with age while wild-type worms lose neuronal function, we carried out neuron-specific transcriptomic analysis in aged animals. We observed downregulation of neuronal genes and upregulation of transcriptional regulation genes in aging wild-type neurons. By contrast, IIS/FOXO pathway mutants exhibit distinct neuronal transcriptomic alterations in response to cognitive aging, including upregulation of stress response genes and downregulation of specific insulin signaling genes. We tested the roles of significantly transcriptionally-changed genes in regulating cognitive functions, identifying novel regulators of learning and memory. In addition to other mechanistic insights, comparison of the aged vs young daf-2 neuronal transcriptome revealed that a new set of potentially neuroprotective genes is upregulated; instead of simply mimicking a young state, daf-2 may enhance neuronal resilience to accumulation of harm and take a more active approach to combat aging. These findings suggest a potential mechanism for regulating cognitive function with age and offer insights into novel therapeutic targets for age-related cognitive decline.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • The significant differences between this version and the previous version includes: 1. Changing the wording throughout the manuscript to specify neuron-sensitized RNAi strain is used 2. Changes to Figure 2 legend and Figure 4 legend to highlight the strains used 3. Updates to Table 1 citations 4. Updates to Figure 5 model.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted June 18, 2024.
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The Neuron-specific IIS/FOXO Transcriptome in Aged Animals Reveals Regulatory Mechanisms of Cognitive Aging
Yifei Weng, Shiyi Zhou, Katherine Morillo, Rachel Kaletsky, Sarah Lin, Coleen T. Murphy
bioRxiv 2023.07.28.550894; doi: https://doi.org/10.1101/2023.07.28.550894
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The Neuron-specific IIS/FOXO Transcriptome in Aged Animals Reveals Regulatory Mechanisms of Cognitive Aging
Yifei Weng, Shiyi Zhou, Katherine Morillo, Rachel Kaletsky, Sarah Lin, Coleen T. Murphy
bioRxiv 2023.07.28.550894; doi: https://doi.org/10.1101/2023.07.28.550894

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