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Differences in Oligomerization of the SARS-CoV-2 Envelope Protein, Poliovirus VP4, and HIV Vpu

Julia A. Townsend, Oluwaseun Fapohunda, Zhihan Wang, Hieu Pham, Michael T. Taylor, Brian Kloss, Sang Ho Park, Stanley Opella, Craig A. Aspinwall, View ORCID ProfileMichael T. Marty
doi: https://doi.org/10.1101/2023.08.18.553902
Julia A. Townsend
1Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
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Oluwaseun Fapohunda
1Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
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Zhihan Wang
1Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
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Hieu Pham
1Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
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Michael T. Taylor
1Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
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Brian Kloss
2New York Consortium on Membrane Protein Structure, New York Structural Biology Center, New York, NY 10027, USA
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Sang Ho Park
3Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA
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Stanley Opella
3Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA
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Craig A. Aspinwall
1Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
4Bio5 Institute, The University of Arizona, Tucson, Arizona 85721, United States
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Michael T. Marty
1Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
4Bio5 Institute, The University of Arizona, Tucson, Arizona 85721, United States
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  • ORCID record for Michael T. Marty
  • For correspondence: mtmarty@arizona.edu
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ABSTRACT

Viroporins constitute a class of viral membrane proteins with diverse roles in the viral life cycle. They can self-assemble and form pores within the bilayer that transport substrates, such as ions and genetic material, that are critical to the viral infection cycle. However, there is little known about the oligomeric state of most viroporins. Here, we use native mass spectrometry (MS) in detergent micelles to uncover the patterns of oligomerization of the full-length SARS-CoV-2 envelope (E) protein, poliovirus VP4, and HIV Vpu. Our data suggest that the E protein is a specific dimer, VP4 is exclusively monomeric, and Vpu assembles into a polydisperse mixture of oligomers under these conditions. Overall, these results revealed the diversity in the oligomerization of viroporins, which has implications for mechanisms of their biological functions as well as their potential as therapeutic targets.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted August 20, 2023.
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Differences in Oligomerization of the SARS-CoV-2 Envelope Protein, Poliovirus VP4, and HIV Vpu
Julia A. Townsend, Oluwaseun Fapohunda, Zhihan Wang, Hieu Pham, Michael T. Taylor, Brian Kloss, Sang Ho Park, Stanley Opella, Craig A. Aspinwall, Michael T. Marty
bioRxiv 2023.08.18.553902; doi: https://doi.org/10.1101/2023.08.18.553902
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Differences in Oligomerization of the SARS-CoV-2 Envelope Protein, Poliovirus VP4, and HIV Vpu
Julia A. Townsend, Oluwaseun Fapohunda, Zhihan Wang, Hieu Pham, Michael T. Taylor, Brian Kloss, Sang Ho Park, Stanley Opella, Craig A. Aspinwall, Michael T. Marty
bioRxiv 2023.08.18.553902; doi: https://doi.org/10.1101/2023.08.18.553902

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