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ATG8 delipidation is dispensable for plant autophagy

View ORCID ProfileSanjana Holla, View ORCID ProfileYong Zou, View ORCID ProfileIgor Sabljić, View ORCID ProfileJonas A Ohlsson, View ORCID ProfileJia Xuan Leong, View ORCID ProfileFlorentine Ballhaus, View ORCID ProfileMelanie Krebs, View ORCID ProfileKarin Schumacher, View ORCID ProfileSuayib Üstün, View ORCID ProfileYasin Dagdas, View ORCID ProfilePeter V Bozhkov, View ORCID ProfileElena A Minina
doi: https://doi.org/10.1101/2023.08.23.554513
Sanjana Holla
1Department of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, SE-750 07, Sweden
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Yong Zou
1Department of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, SE-750 07, Sweden
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Igor Sabljić
1Department of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, SE-750 07, Sweden
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Jonas A Ohlsson
1Department of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, SE-750 07, Sweden
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Jia Xuan Leong
2Department of Algal Development and Evolution, Max Planck Institute for Biology Tübingen, Tübingen, Germany
3Centre for Organismal Studies (COS), Heidelberg University. Im Neuenheimer Feld 230. 69120 Heidelberg, Germany
4Center for Plant Molecular Biology (ZMBP), University of Tübingen, Auf der Morgenstelle 32. D-72076 Tübingen, Germany
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Florentine Ballhaus
1Department of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, SE-750 07, Sweden
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Melanie Krebs
3Centre for Organismal Studies (COS), Heidelberg University. Im Neuenheimer Feld 230. 69120 Heidelberg, Germany
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Karin Schumacher
3Centre for Organismal Studies (COS), Heidelberg University. Im Neuenheimer Feld 230. 69120 Heidelberg, Germany
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Suayib Üstün
5Faculty of Biology and Biotechnology, Ruhr-University Bochum, Bochum, Germany
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Yasin Dagdas
6Gregor Mendel Institute of Molecular Plant Biology, Austrian Academy of Sciences, Vienna BioCenter 1030 Vienna, Austria
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Peter V Bozhkov
1Department of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, SE-750 07, Sweden
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Elena A Minina
1Department of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, SE-750 07, Sweden
3Centre for Organismal Studies (COS), Heidelberg University. Im Neuenheimer Feld 230. 69120 Heidelberg, Germany
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  • For correspondence: alena.minina@slu.se
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Abstract

Intracellular recycling via autophagy is governed by post-translational modifications of the autophagy related (ATG) proteins. One example is ATG4-dependent delipidation of ATG8, which assumes critical but distinct roles in autophagosome formation of yeast and mammals. Here, we discovered that ATG8 delipidation is dispensable for the maturation of autophagosomes, autophagic flux and related stress tolerance in Arabidopsis. In contrast, autophagy in an evolutionary distant Chlamydomonas strictly required ATG4-dependent ATG8 delipidation. Additionally, we uncovered distinct participation of Arabidopsis ATG8 orthologs in autophagosome biogenesis, especially prevalent under nitrogen depletion, thereby providing new insights into potential reasons behind ATG8 gene family expansion in vascular plants.

Our findings point to evolutionary diversification of the molecular mechanism governing maturation of autophagosomes in eukaryotic lineages and highlight how this conserved pathway is tailored to diverse eukaryotic organisms.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 01, 2023.
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ATG8 delipidation is dispensable for plant autophagy
Sanjana Holla, Yong Zou, Igor Sabljić, Jonas A Ohlsson, Jia Xuan Leong, Florentine Ballhaus, Melanie Krebs, Karin Schumacher, Suayib Üstün, Yasin Dagdas, Peter V Bozhkov, Elena A Minina
bioRxiv 2023.08.23.554513; doi: https://doi.org/10.1101/2023.08.23.554513
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ATG8 delipidation is dispensable for plant autophagy
Sanjana Holla, Yong Zou, Igor Sabljić, Jonas A Ohlsson, Jia Xuan Leong, Florentine Ballhaus, Melanie Krebs, Karin Schumacher, Suayib Üstün, Yasin Dagdas, Peter V Bozhkov, Elena A Minina
bioRxiv 2023.08.23.554513; doi: https://doi.org/10.1101/2023.08.23.554513

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