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A cryo-ET study of ciliary rootlet organization

View ORCID ProfileChris van Hoorn, View ORCID ProfileAndrew P. Carter
doi: https://doi.org/10.1101/2023.09.03.556114
Chris van Hoorn
1MRC Laboratory of Molecular Biology, Francis Crick Ave, Cambridge, CB2 0QH, UK
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  • For correspondence: [email protected] [email protected]
Andrew P. Carter
1MRC Laboratory of Molecular Biology, Francis Crick Ave, Cambridge, CB2 0QH, UK
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  • For correspondence: [email protected] [email protected]
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Abstract

Ciliary rootlets are striated bundles of filaments that connect the base of cilia to internal cellular structures. Rootlets are critical for the sensory and motile functions of cilia. However, the mechanisms underlying these functions remain unknown, in part due to a lack of structural information of rootlet organization. In this study, we obtain 3D reconstructions of membrane-associated and purified rootlets using cryo-electron tomography (cryo-ET). We show that flexible protrusions on the rootlet surface, which emanate from the cross-striations, connect to intracellular membranes. In purified rootlets, the striations were classified into amorphous (A)-bands, associated with accumulations on the rootlet surface, and discrete (D)-bands corresponding to punctate lines of density that run through the rootlet. These striations connect a flexible network of longitudinal filaments. Subtomogram averaging suggests the filaments consist of two intertwined coiled coils. The rootlet’s filamentous architecture, with frequent membrane-connecting cross-striations, lends itself well for anchoring large membranes in the cell.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Section on cross-striations updated to clarify the approach for segmentation of membrane-associated densities and the comparison of striations between purified and semi-purified samples; Segmentation, alphafold and subtomogram averaging methods updated for improved reproducibility and transparency; Fig S1 revised; Fig S3 revised.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted April 16, 2024.
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A cryo-ET study of ciliary rootlet organization
Chris van Hoorn, Andrew P. Carter
bioRxiv 2023.09.03.556114; doi: https://doi.org/10.1101/2023.09.03.556114
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A cryo-ET study of ciliary rootlet organization
Chris van Hoorn, Andrew P. Carter
bioRxiv 2023.09.03.556114; doi: https://doi.org/10.1101/2023.09.03.556114

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