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Haplotype independence contributes to evolvability in the long-term absence of sex in a mite

View ORCID ProfileHüsna Öztoprak, View ORCID ProfileShan Gao, View ORCID ProfileNadège Guiglielmoni, View ORCID ProfileAlexander Brandt, View ORCID ProfileYichen Zheng, Christian Becker, Kerstin Becker, View ORCID ProfileViktoria Bednarski, View ORCID ProfileLea Borgschulte, View ORCID ProfileKatharina Atsuko Burak, Anne-Marie Dion-Côté, View ORCID ProfileVladislav Leonov, View ORCID ProfileLinda Opherden, View ORCID ProfileSatoshi Shimano, View ORCID ProfileJens Bast
doi: https://doi.org/10.1101/2023.09.07.556471
Hüsna Öztoprak
1Institute of Zoology, University of Cologne; Cologne, Germany
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  • For correspondence: h.oeztoprak@uni-koeln.de mail@jensbast.com
Shan Gao
1Institute of Zoology, University of Cologne; Cologne, Germany
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Nadège Guiglielmoni
1Institute of Zoology, University of Cologne; Cologne, Germany
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Alexander Brandt
2Department of Ecology and Evolution, University of Lausanne; Lausanne, Switzerland
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Yichen Zheng
1Institute of Zoology, University of Cologne; Cologne, Germany
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Christian Becker
3Cologne Center for Genomics (CCG), Medical Faculty, University of Cologne; Cologne, Germany
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Kerstin Becker
3Cologne Center for Genomics (CCG), Medical Faculty, University of Cologne; Cologne, Germany
4Genomics & Transcriptomics Laboratory, Biologisch-Medizinisches Forschungszentrum, Heinrich-Heine-Universität Düsseldorf; Düsseldorf, Germany
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Viktoria Bednarski
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Lea Borgschulte
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Katharina Atsuko Burak
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Anne-Marie Dion-Côté
6Département de Biologie, Université de Moncton; Moncton, Canada
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Vladislav Leonov
5A.N. Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences; Moscow, Russia
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Linda Opherden
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Satoshi Shimano
7Science Research Center, Hosei University; Tokyo, Japan
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Jens Bast
1Institute of Zoology, University of Cologne; Cologne, Germany
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  • For correspondence: h.oeztoprak@uni-koeln.de mail@jensbast.com
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Abstract

Some unique asexual species persist over time and contradict the consensus that sex is a prerequisite for long-term evolutionary survival. How they escape the dead-end fate remains enigmatic. Here, we generated a haplotype-resolved genome assembly based on a single individual and collected genomic data from worldwide populations of the parthenogenetic diploid oribatid mite Platynothrus peltifer to identify signatures of persistence without sex. We found that haplotypes diverge independently since the transition to asexuality at least 20 my ago. Multiple lines of evidence indicate disparate evolutionary trajectories between haplotypic blocks. Our findings imply that such haplotypic independence can lead to non-canonical routes of evolvability, helping some species to adapt, diversify and persist for millions of years in the absence of sex.

One-Sentence Summary Functionally different chromosome sets in an asexual mite species showcase a survival strategy spanning millions of years.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵† shared first authorship

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted September 10, 2023.
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Haplotype independence contributes to evolvability in the long-term absence of sex in a mite
Hüsna Öztoprak, Shan Gao, Nadège Guiglielmoni, Alexander Brandt, Yichen Zheng, Christian Becker, Kerstin Becker, Viktoria Bednarski, Lea Borgschulte, Katharina Atsuko Burak, Anne-Marie Dion-Côté, Vladislav Leonov, Linda Opherden, Satoshi Shimano, Jens Bast
bioRxiv 2023.09.07.556471; doi: https://doi.org/10.1101/2023.09.07.556471
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Haplotype independence contributes to evolvability in the long-term absence of sex in a mite
Hüsna Öztoprak, Shan Gao, Nadège Guiglielmoni, Alexander Brandt, Yichen Zheng, Christian Becker, Kerstin Becker, Viktoria Bednarski, Lea Borgschulte, Katharina Atsuko Burak, Anne-Marie Dion-Côté, Vladislav Leonov, Linda Opherden, Satoshi Shimano, Jens Bast
bioRxiv 2023.09.07.556471; doi: https://doi.org/10.1101/2023.09.07.556471

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