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NatB-dependent acetylation protects procaspase-8 from UBR4-mediated degradation and is required for full induction of the extrinsic apoptosis pathway

View ORCID ProfileJoana P. Guedes, View ORCID ProfileJean Baptiste Boyer, View ORCID ProfileJasmine Elurbide, View ORCID ProfileBeatriz Carte, View ORCID ProfileVirginie Redeker, Laila Sago, View ORCID ProfileThierry Meinnel, View ORCID ProfileManuela Côrte-Real, View ORCID ProfileCarmela Giglione, View ORCID ProfileRafael Aldabe
doi: https://doi.org/10.1101/2023.09.25.559278
Joana P. Guedes
1CBMA/UM – Centre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, 4710-057 Braga, Portugal
2Institute of Science and Innovation for Bio-Sustainability (IB-S), Campus de Gualtar, University of Minho, 4710-057 Braga, Portugal
3CIMA/UNAV – Centro de Investigacíon Médica Aplicada (CIMA), Universidad de Navarra, 31008 Pamplona, Spain
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Jean Baptiste Boyer
4Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France
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Jasmine Elurbide
3CIMA/UNAV – Centro de Investigacíon Médica Aplicada (CIMA), Universidad de Navarra, 31008 Pamplona, Spain
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Beatriz Carte
3CIMA/UNAV – Centro de Investigacíon Médica Aplicada (CIMA), Universidad de Navarra, 31008 Pamplona, Spain
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Virginie Redeker
4Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France
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Laila Sago
4Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France
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Thierry Meinnel
4Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France
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Manuela Côrte-Real
1CBMA/UM – Centre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, 4710-057 Braga, Portugal
2Institute of Science and Innovation for Bio-Sustainability (IB-S), Campus de Gualtar, University of Minho, 4710-057 Braga, Portugal
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  • For correspondence: raldabe@unav.es
Carmela Giglione
4Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France
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  • For correspondence: raldabe@unav.es
Rafael Aldabe
3CIMA/UNAV – Centro de Investigacíon Médica Aplicada (CIMA), Universidad de Navarra, 31008 Pamplona, Spain
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  • For correspondence: raldabe@unav.es
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ABSTRACT

N-terminal acetyltransferase B (NatB) is a major contributor to the N-terminal acetylome and is implicated in several key cellular processes including apoptosis and proteostasis. However, the molecular mechanisms linking NatB-mediated N-terminal acetylation to apoptosis and its relationship with protein homeostasis remain elusive. In this study, we generated mouse embryonic fibroblasts (MEFs) with an inactivated catalytic subunit of NatB (Naa20-/-) to investigate the impact of NatB deficiency on apoptosis regulation. Through quantitative N-terminomics, label-free quantification, and targeted proteomics, we demonstrated that NatB does not influence the proteostasis of all its substrates. Instead, our focus on putative NatB-dependent apoptotic factors revealed that NatB-mediated acetylation serves as a protective shield against UBR4 and UBR1 Arg/N-recognin-mediated degradation. Notably, Naa20-/- MEFs exhibited reduced responsiveness to extrinsic pro-apoptotic stimuli, a phenotype that was partially reversible upon UBR4 Arg/N-recognin silencing and consequent inhibition of procaspase-8 degradation. Collectively, our results shed light on how the interplay between NatB-mediated acetylation and the Arg/N-degron pathway impacts apoptosis regulation, providing new perspectives in the field including in therapeutic interventions.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://proteomecentral.protemeexhange.org

  • https://www.ebi.ac.uk/pride/

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 25, 2023.
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NatB-dependent acetylation protects procaspase-8 from UBR4-mediated degradation and is required for full induction of the extrinsic apoptosis pathway
Joana P. Guedes, Jean Baptiste Boyer, Jasmine Elurbide, Beatriz Carte, Virginie Redeker, Laila Sago, Thierry Meinnel, Manuela Côrte-Real, Carmela Giglione, Rafael Aldabe
bioRxiv 2023.09.25.559278; doi: https://doi.org/10.1101/2023.09.25.559278
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NatB-dependent acetylation protects procaspase-8 from UBR4-mediated degradation and is required for full induction of the extrinsic apoptosis pathway
Joana P. Guedes, Jean Baptiste Boyer, Jasmine Elurbide, Beatriz Carte, Virginie Redeker, Laila Sago, Thierry Meinnel, Manuela Côrte-Real, Carmela Giglione, Rafael Aldabe
bioRxiv 2023.09.25.559278; doi: https://doi.org/10.1101/2023.09.25.559278

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