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Steady-state neuron-predominant LINE-1 encoded ORF1p protein and LINE-1 RNA increase with aging in the mouse and human brain

Tom Bonnifet, Sandra Sinnassamy, Olivia Massiani-Beaudoin, Philippe Mailly, Héloïse Monnet, Damarys Loew, Berangère Lombard, Nicolas Servant, Rajiv L. Joshi, Julia Fuchs
doi: https://doi.org/10.1101/2023.12.12.571308
Tom Bonnifet
1CIRB, Collège de France, Université PSL, INSERM, CNRS, 75005, Paris, France
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Sandra Sinnassamy
1CIRB, Collège de France, Université PSL, INSERM, CNRS, 75005, Paris, France
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Olivia Massiani-Beaudoin
1CIRB, Collège de France, Université PSL, INSERM, CNRS, 75005, Paris, France
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Philippe Mailly
2Orion Technological Core, CIRB, Collège de France, Université PSL, INSERM, CNRS, 75005, Paris, France
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Héloïse Monnet
2Orion Technological Core, CIRB, Collège de France, Université PSL, INSERM, CNRS, 75005, Paris, France
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Damarys Loew
3Institut Curie, Université PSL, Centre de Recherche, CurieCoreTech Spectrométrie de Masse Protéomique, 26 rue d’Ulm, Paris 75248 Cedex 05, France
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Berangère Lombard
3Institut Curie, Université PSL, Centre de Recherche, CurieCoreTech Spectrométrie de Masse Protéomique, 26 rue d’Ulm, Paris 75248 Cedex 05, France
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Nicolas Servant
4Institut Curie, INSERM U900, Mines Paris Tech, Université PSL
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Rajiv L. Joshi
1CIRB, Collège de France, Université PSL, INSERM, CNRS, 75005, Paris, France
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  • For correspondence: [email protected] [email protected]
Julia Fuchs
1CIRB, Collège de France, Université PSL, INSERM, CNRS, 75005, Paris, France
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  • For correspondence: [email protected] [email protected]
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Abstract

Recent studies have established a reciprocal causal link between aging and the activation of transposable elements, characterized in particular by a de-repression of LINE-1 retrotransposons. These LINE-1 elements represent 21% of the human genome, but only a minority of these sequences retain the coding potential essential for their mobility. LINE-1 encoded proteins can induce cell toxicity implicated in aging and neurodegenerative diseases. However, our knowledge of the expression and localization of LINE-1-encoded proteins in the central nervous system is limited. Using a novel approach combining atlas-based brain mapping with deep-learning algorithms on large-scale pyramidal brain images, we unveil a heterogeneous, neuron-predominant and widespread ORF1p expression throughout the murine brain at steady-state. In aged mice, ORF1p expression increases significantly which is corroborated in human post-mortem dopaminergic neurons by an increase in young LINE-1 elements including those with open reading frames. Mass spectrometry analysis of endogenous mouse ORF1p revealed novel, neuron-specific protein interactors. These findings contribute to a comprehensive description of the dynamics of LINE-1 and ORF1p expression in the brain at steady-state and in aging and provide insights on ORF1p protein interactions in the brain.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Figure 2 and supplementary figures 1 and 2 revised.

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Posted June 13, 2024.
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Steady-state neuron-predominant LINE-1 encoded ORF1p protein and LINE-1 RNA increase with aging in the mouse and human brain
Tom Bonnifet, Sandra Sinnassamy, Olivia Massiani-Beaudoin, Philippe Mailly, Héloïse Monnet, Damarys Loew, Berangère Lombard, Nicolas Servant, Rajiv L. Joshi, Julia Fuchs
bioRxiv 2023.12.12.571308; doi: https://doi.org/10.1101/2023.12.12.571308
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Steady-state neuron-predominant LINE-1 encoded ORF1p protein and LINE-1 RNA increase with aging in the mouse and human brain
Tom Bonnifet, Sandra Sinnassamy, Olivia Massiani-Beaudoin, Philippe Mailly, Héloïse Monnet, Damarys Loew, Berangère Lombard, Nicolas Servant, Rajiv L. Joshi, Julia Fuchs
bioRxiv 2023.12.12.571308; doi: https://doi.org/10.1101/2023.12.12.571308

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