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Loss of ZNRF3/RNF43 Unleashes EGFR in Cancer

View ORCID ProfileFei Yue, Amy T. Ku, Payton D. Stevens, View ORCID ProfileMegan N. Michalski, Weiyu Jiang, Jianghua Tu, Zhongcheng Shi, Yongchao Dou, Yi Wang, Xin-Hua Feng, Galen Hostetter, Xiangwei Wu, Shixia Huang, View ORCID ProfileNoah F. Shroyer, Bing Zhang, Bart O. Williams, Qingyun Liu, Xia Lin, View ORCID ProfileYi Li
doi: https://doi.org/10.1101/2024.01.10.574969
Fei Yue
1Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas 77030, USA
2Department of Medicine, Baylor College of Medicine, Houston, Texas 77030, USA
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  • For correspondence: [email protected] [email protected]
Amy T. Ku
1Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas 77030, USA
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Payton D. Stevens
3Department of Cell Biology, Van Andel Institute, Grand Rapids, Michigan, 49503, USA
4Biological Sciences Department, Miami University, Oxford, Ohio, 45056, USA
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Megan N. Michalski
3Department of Cell Biology, Van Andel Institute, Grand Rapids, Michigan, 49503, USA
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  • ORCID record for Megan N. Michalski
Weiyu Jiang
1Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas 77030, USA
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Jianghua Tu
5Texas Therapeutics Institute and Brown Foundation Institute of Molecular Medicine, University of Texas Health Science Center at Houston, Houston, Texas 77030, USA
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Zhongcheng Shi
6Advanced Technology Cores, Baylor College of Medicine, Houston, Texas 77030, USA
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Yongchao Dou
1Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas 77030, USA
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Yi Wang
7State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing 102206, China
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Xin-Hua Feng
8Life Sciences Institute, Zhejiang University, Hangzhou, Zhejiang 310058, China
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Galen Hostetter
9Van Andel Institute, Core Technologies and Services, Grand Rapids, Michigan 49503, USA
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Xiangwei Wu
10Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030, USA
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Shixia Huang
6Advanced Technology Cores, Baylor College of Medicine, Houston, Texas 77030, USA
11Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA
12Department of Education, Innovation & Technology, Baylor College of Medicine, Houston, Texas 77030, USA
13Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas 77030, USA
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Noah F. Shroyer
2Department of Medicine, Baylor College of Medicine, Houston, Texas 77030, USA
13Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas 77030, USA
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Bing Zhang
1Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas 77030, USA
13Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas 77030, USA
14Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA
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Bart O. Williams
3Department of Cell Biology, Van Andel Institute, Grand Rapids, Michigan, 49503, USA
9Van Andel Institute, Core Technologies and Services, Grand Rapids, Michigan 49503, USA
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Qingyun Liu
5Texas Therapeutics Institute and Brown Foundation Institute of Molecular Medicine, University of Texas Health Science Center at Houston, Houston, Texas 77030, USA
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Xia Lin
15The First Affiliated Hospital of Zhejiang University, Hangzhou, Zhejiang 310003, China
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Yi Li
1Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, Texas 77030, USA
11Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA
13Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas 77030, USA
16Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas 77030, USA
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  • For correspondence: [email protected] [email protected]
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Abstract

ZNRF3 and RNF43 are closely related transmembrane E3 ubiquitin ligases with significant roles in development and cancer. Conventionally, their biological functions have been associated with regulating WNT signaling receptor ubiquitination and degradation. However, our proteogenomic studies have revealed EGFR as the protein most negatively correlated with ZNRF3/RNF43 mRNA levels in multiple human cancers. Through biochemical investigations, we demonstrate that ZNRF3/RNF43 interact with EGFR via their extracellular domains, leading to EGFR ubiquitination and subsequent degradation facilitated by the E3 ligase RING domain. Overexpression of ZNRF3 reduces EGFR levels and suppresses cancer cell growth in vitro and in vivo, whereas knockout of ZNRF3/RNF43 stimulates cell growth and tumorigenesis through upregulated EGFR signaling. Together, these data highlight ZNRF3 and RNF43 as novel E3 ubiquitin ligases of EGFR and establish the inactivation of ZNRF3/RNF43 as a driver of increased EGFR signaling, ultimately promoting cancer progression. This discovery establishes a connection between two fundamental signaling pathways, EGFR and WNT, at the level of cytoplasmic membrane receptors, uncovering a novel mechanism underlying the frequent co-activation of EGFR and WNT signaling in development and cancer.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Added new data and revised the text to address reviewers' concerns.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted December 16, 2024.
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Loss of ZNRF3/RNF43 Unleashes EGFR in Cancer
Fei Yue, Amy T. Ku, Payton D. Stevens, Megan N. Michalski, Weiyu Jiang, Jianghua Tu, Zhongcheng Shi, Yongchao Dou, Yi Wang, Xin-Hua Feng, Galen Hostetter, Xiangwei Wu, Shixia Huang, Noah F. Shroyer, Bing Zhang, Bart O. Williams, Qingyun Liu, Xia Lin, Yi Li
bioRxiv 2024.01.10.574969; doi: https://doi.org/10.1101/2024.01.10.574969
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Loss of ZNRF3/RNF43 Unleashes EGFR in Cancer
Fei Yue, Amy T. Ku, Payton D. Stevens, Megan N. Michalski, Weiyu Jiang, Jianghua Tu, Zhongcheng Shi, Yongchao Dou, Yi Wang, Xin-Hua Feng, Galen Hostetter, Xiangwei Wu, Shixia Huang, Noah F. Shroyer, Bing Zhang, Bart O. Williams, Qingyun Liu, Xia Lin, Yi Li
bioRxiv 2024.01.10.574969; doi: https://doi.org/10.1101/2024.01.10.574969

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