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Decoding the Cognitive map: Learning place cells and remapping

View ORCID ProfileMarkus Borud Pettersen, View ORCID ProfileVemund Sigmundson Schøyen, View ORCID ProfileAnders Malthe-Sørenssen, View ORCID ProfileMikkel Elle Lepperød
doi: https://doi.org/10.1101/2024.03.14.585049
Markus Borud Pettersen
1Simula Research Laboratory
3University of Oslo, Department of Physics
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Vemund Sigmundson Schøyen
2University of Oslo, Department of Biosciences
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Anders Malthe-Sørenssen
3University of Oslo, Department of Physics
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Mikkel Elle Lepperød
1Simula Research Laboratory
3University of Oslo, Department of Physics
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  • For correspondence: [email protected]
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Abstract

Hippocampal place cells are known for their spatially selective firing and are believed to encode an animal’s location while forming part of a cognitive map of space. These cells exhibit marked tuning curve and rate changes when an animal’s environment is sufficiently manipulated, in a process known as remapping. Place cells are accompanied by many other spatially tuned cells such as border cells and grid cells, but how these cells interact during navigation and remapping is unknown. In this work, we build a normative place cell model wherein a neural network is tasked with accurate position reconstruction and path integration. Motivated by the notion of a cognitive map, the network’s position is estimated directly from its learned representations. To obtain a position estimate, we propose a non-trainable decoding scheme applied to network output units, inspired by the localized firing patterns of place cells. We find that output units learn place-like spatial representations, while upstream recurrent units become boundary-tuned. When the network is trained to perform the same task in multiple simulated environments, its place-like units learn to remap like biological place cells, displaying global, geometric and rate remapping. These remapping abilities appear to be supported by rate changes in upstream units. While the model does not learn grid-like units, its place cell centers form clusters organized in a hexagonal lattice in open fields. When we decode the center locations of CA1 place fields in mice, we find a similar clustering tendency. This suggests a potential mechanism for the interaction between place cells, border cells, and grid cells. Our model provides a normative framework for learning spatial representations previously reserved for biological place cells, providing new insight into place cell field formation and remapping.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • To further evaluate the predictions of our proposed model of place field distribution, we added a comparison to experimental data, which corroborates our findings.

  • https://github.com/bioAI-Oslo/VPC

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted March 25, 2024.
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Decoding the Cognitive map: Learning place cells and remapping
Markus Borud Pettersen, Vemund Sigmundson Schøyen, Anders Malthe-Sørenssen, Mikkel Elle Lepperød
bioRxiv 2024.03.14.585049; doi: https://doi.org/10.1101/2024.03.14.585049
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Decoding the Cognitive map: Learning place cells and remapping
Markus Borud Pettersen, Vemund Sigmundson Schøyen, Anders Malthe-Sørenssen, Mikkel Elle Lepperød
bioRxiv 2024.03.14.585049; doi: https://doi.org/10.1101/2024.03.14.585049

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