Local Gene Duplications Drive Extensive NLR Copy Number Variation Across Multiple Genotypes of Theobroma cacao

Noah P. Winters; Eric K. Wafula; Prakash R. Timilsena; Paula E. Ralph; Siela N. Maximova; Claude W. de Pamphilis; Mark J. Guiltinan; James H. Marden

doi:10.1101/2024.09.01.610724

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Local Gene Duplications Drive Extensive NLR Copy Number Variation Across Multiple Genotypes of Theobroma cacao

Noah P. Winters, Eric K. Wafula, Prakash R. Timilsena, Paula E. Ralph, Siela N. Maximova, Claude W. de Pamphilis, Mark J. Guiltinan, James H. Marden

doi: https://doi.org/10.1101/2024.09.01.610724

Noah P. Winters

1IGDP Ecology, The Pennsylvania State University, University Park, PA

2Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA

3Applied Science and Technology, Battelle Memorial Institute, Columbus, Ohio, USA

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For correspondence: winters@battelle.org

Eric K. Wafula

4Department of Biology, The Pennsylvania State University, University Park, PA

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Prakash R. Timilsena

4Department of Biology, The Pennsylvania State University, University Park, PA

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Paula E. Ralph

4Department of Biology, The Pennsylvania State University, University Park, PA

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Siela N. Maximova

2Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA

6Department of Plant Science, The Pennsylvania State University, University Park, PA

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Claude W. de Pamphilis

2Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA

4Department of Biology, The Pennsylvania State University, University Park, PA

5IGDP Plant Biology, The Pennsylvania State University, University Park, PA

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Mark J. Guiltinan

2Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA

4Department of Biology, The Pennsylvania State University, University Park, PA

5IGDP Plant Biology, The Pennsylvania State University, University Park, PA

6Department of Plant Science, The Pennsylvania State University, University Park, PA

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James H. Marden

2Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA

4Department of Biology, The Pennsylvania State University, University Park, PA

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Local Gene Duplications Drive Extensive NLR Copy Number Variation Across Multiple Genotypes of Theobroma cacao

Noah P. Winters, Eric K. Wafula, Prakash R. Timilsena, Paula E. Ralph, Siela N. Maximova, Claude W. de Pamphilis, Mark J. Guiltinan, James H. Marden

bioRxiv 2024.09.01.610724; doi: https://doi.org/10.1101/2024.09.01.610724

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Local Gene Duplications Drive Extensive NLR Copy Number Variation Across Multiple Genotypes of Theobroma cacao

Noah P. Winters, Eric K. Wafula, Prakash R. Timilsena, Paula E. Ralph, Siela N. Maximova, Claude W. de Pamphilis, Mark J. Guiltinan, James H. Marden

bioRxiv 2024.09.01.610724; doi: https://doi.org/10.1101/2024.09.01.610724

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