GuaCAMOLE: GC-bias aware estimation improves the accuracy of metagenomic species abundances

Laurenz Holcik; Arndt von Haseseler; Florian G. Pflug

doi:10.1101/2024.09.20.614100

New Results

GuaCAMOLE: GC-bias aware estimation improves the accuracy of metagenomic species abundances

View ORCID ProfileLaurenz Holcik, View ORCID ProfileArndt von Haseseler, View ORCID ProfileFlorian G. Pflug

doi: https://doi.org/10.1101/2024.09.20.614100

Laurenz Holcik

1Center for Integrative Bioinformatics Vienna (CIBIV), University of Vienna, Dr. Bohr Gasse 9, 1030 Vienna, Austria

2Vienna BioCenter PhD Program, a Doctoral School of the University of Vienna and Medical University of Vienna, Dr. Bohr Gasse 9, 1030 Vienna, Austria

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Laurenz Holcik

Arndt von Haseseler

1Center for Integrative Bioinformatics Vienna (CIBIV), University of Vienna, Dr. Bohr Gasse 9, 1030 Vienna, Austria

3Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, 1090 Vienna, Austria

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Arndt von Haseseler

Florian G. Pflug

1Center for Integrative Bioinformatics Vienna (CIBIV), University of Vienna, Dr. Bohr Gasse 9, 1030 Vienna, Austria

4Biological Complexity Unit, Okinawa Institute of Science and Technology, 1919-1 Tancha, Onna, 904-0495 Okinawa, Japan

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Florian G. Pflug
For correspondence: florian.pflug@univie.ac.at

Abstract
Full Text
Info/History
Metrics
Data/Code
Preview PDF

Article usage

Article usage: September 2024 to December 2024

	Abstract	Full	Pdf
Sep 2024	542	24	133
Oct 2024	134	18	67
Nov 2024	71	10	42
Dec 2024	25	13	17

View the discussion thread.

PreviousNext

Posted September 23, 2024.

Download PDF

Data/Code

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following GuaCAMOLE: GC-bias aware estimation improves the accuracy of metagenomic species abundances

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

GuaCAMOLE: GC-bias aware estimation improves the accuracy of metagenomic species abundances

Laurenz Holcik, Arndt von Haseseler, Florian G. Pflug

bioRxiv 2024.09.20.614100; doi: https://doi.org/10.1101/2024.09.20.614100

Share This Article:

Citation Tools

GuaCAMOLE: GC-bias aware estimation improves the accuracy of metagenomic species abundances

Laurenz Holcik, Arndt von Haseseler, Florian G. Pflug

bioRxiv 2024.09.20.614100; doi: https://doi.org/10.1101/2024.09.20.614100

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Bioinformatics

Subject Areas

All Articles

Animal Behavior and Cognition (5924)
Biochemistry (13424)
Bioengineering (10218)
Bioinformatics (32659)
Biophysics (16842)
Cancer Biology (13900)
Cell Biology (19734)
Clinical Trials (138)
Developmental Biology (10669)
Ecology (15781)
Epidemiology (2067)
Evolutionary Biology (20093)
Genetics (13260)
Genomics (18411)
Immunology (13509)
Microbiology (31640)
Molecular Biology (13186)
Neuroscience (68917)
Paleontology (512)
Pathology (2138)
Pharmacology and Toxicology (3687)
Physiology (5753)
Plant Biology (11829)
Scientific Communication and Education (1793)
Synthetic Biology (3317)
Systems Biology (8060)
Zoology (1821)