Characterization of hairpin loops and cruciforms across 118,065 genomes spanning the tree of life

Nikol Chantzi; Camille Moeckel; Candace S. Y Chan; Akshatha Nayak; Guliang Wang; Ioannis Mouratidis; Dionysios Chartoumpekis; Karen M. Vasquez; Ilias Georgakopoulos-Soares

doi:10.1101/2024.09.29.615628

New Results

Characterization of hairpin loops and cruciforms across 118,065 genomes spanning the tree of life

Nikol Chantzi, Camille Moeckel, Candace S. Y Chan, Akshatha Nayak, Guliang Wang, Ioannis Mouratidis, Dionysios Chartoumpekis, Karen M. Vasquez, View ORCID ProfileIlias Georgakopoulos-Soares

doi: https://doi.org/10.1101/2024.09.29.615628

Nikol Chantzi

1Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Camille Moeckel

1Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Candace S. Y Chan

1Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Akshatha Nayak

1Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Guliang Wang

2Division of Pharmacology and Toxicology, College of Pharmacy, The University of Texas at Austin, Dell Pediatric Research Institute, Austin, TX, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Ioannis Mouratidis

1Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Dionysios Chartoumpekis

3Division of Endocrinology, Department of Internal Medicine, School of Medicine, University of Patras, Greece. Asklipiou 1, 26504, Greece

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Karen M. Vasquez

2Division of Pharmacology and Toxicology, College of Pharmacy, The University of Texas at Austin, Dell Pediatric Research Institute, Austin, TX, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
For correspondence: karen.vasquez@austin.utexas.edu izg5139@psu.edu

Ilias Georgakopoulos-Soares

1Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Ilias Georgakopoulos-Soares
For correspondence: karen.vasquez@austin.utexas.edu izg5139@psu.edu

Abstract
Full Text
Info/History
Metrics
Preview PDF

Article usage

Article usage: September 2024 to December 2024

	Abstract	Full	Pdf
Sep 2024	454	0	67
Oct 2024	199	26	125
Nov 2024	46	10	27
Dec 2024	0	1	0

View the discussion thread.

PreviousNext

Posted September 29, 2024.

Download PDF

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following Characterization of hairpin loops and cruciforms across 118,065 genomes spanning the tree of life

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

Characterization of hairpin loops and cruciforms across 118,065 genomes spanning the tree of life

Nikol Chantzi, Camille Moeckel, Candace S. Y Chan, Akshatha Nayak, Guliang Wang, Ioannis Mouratidis, Dionysios Chartoumpekis, Karen M. Vasquez, Ilias Georgakopoulos-Soares

bioRxiv 2024.09.29.615628; doi: https://doi.org/10.1101/2024.09.29.615628

Share This Article:

Citation Tools

Characterization of hairpin loops and cruciforms across 118,065 genomes spanning the tree of life

Nikol Chantzi, Camille Moeckel, Candace S. Y Chan, Akshatha Nayak, Guliang Wang, Ioannis Mouratidis, Dionysios Chartoumpekis, Karen M. Vasquez, Ilias Georgakopoulos-Soares

bioRxiv 2024.09.29.615628; doi: https://doi.org/10.1101/2024.09.29.615628

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Genomics

Subject Areas

All Articles

Animal Behavior and Cognition (5901)
Biochemistry (13346)
Bioengineering (10160)
Bioinformatics (32493)
Biophysics (16722)
Cancer Biology (13801)
Cell Biology (19627)
Clinical Trials (138)
Developmental Biology (10617)
Ecology (15698)
Epidemiology (2067)
Evolutionary Biology (20009)
Genetics (13210)
Genomics (18337)
Immunology (13434)
Microbiology (31469)
Molecular Biology (13110)
Neuroscience (68620)
Paleontology (508)
Pathology (2124)
Pharmacology and Toxicology (3663)
Physiology (5711)
Plant Biology (11748)
Scientific Communication and Education (1786)
Synthetic Biology (3299)
Systems Biology (8018)
Zoology (1812)