New Results
ERGA-BGE genome of Androsace saussurei Dentant, Lavergne, F. C. Boucher & S. Ibanez, a recently described plant from the rooftops of Europe
View ORCID ProfileSébastien Lavergne, View ORCID ProfileAlexy Rosa, View ORCID ProfileChuan Peng, View ORCID ProfileRita Monteiro, View ORCID ProfileAstrid Böhne, View ORCID ProfileThomas Marcussen, View ORCID ProfileTorsten Struck, View ORCID ProfileRebekah A. Oomen, Genoscope Sequencing Team, Alice Moussy, View ORCID ProfileCorinne Cruaud, View ORCID ProfileKarine Labadie, Emilie Téodori, Lola Demirdjian, Patrick Wincker, View ORCID ProfilePedro H. Oliveira, View ORCID ProfileJean-Marc Aury, Tom Brown
doi: https://doi.org/10.1101/2025.01.21.634019
Sébastien Lavergne
1Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA (Laboratoire d’Écologie Alpine), FR-38000 Grenoble, France
Alexy Rosa
1Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA (Laboratoire d’Écologie Alpine), FR-38000 Grenoble, France
Chuan Peng
1Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA (Laboratoire d’Écologie Alpine), FR-38000 Grenoble, France
2CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, 666303, China
3University of Chinese Academy of Sciences, Beijing, 100049, China
4Center of Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Mengla, Yunnan, 666303, China
Rita Monteiro
5Leibniz Institute for the Analysis of Biodiversity Change - Zoological Research Museum Alexander Koenig Bonn, Adenauerallee 127, 53113 Bonn, Germany
Astrid Böhne
5Leibniz Institute for the Analysis of Biodiversity Change - Zoological Research Museum Alexander Koenig Bonn, Adenauerallee 127, 53113 Bonn, Germany
Thomas Marcussen
6Natural History Museum, University of Oslo, P.O. Box 1172, Blindern, 0318, Oslo, Norway
7Centre for Ecological & Evolutionary Synthesis, University of Oslo, Blindernveien 31, 0371, Oslo, Norway
Torsten Struck
6Natural History Museum, University of Oslo, P.O. Box 1172, Blindern, 0318, Oslo, Norway
Rebekah A. Oomen
6Natural History Museum, University of Oslo, P.O. Box 1172, Blindern, 0318, Oslo, Norway
7Centre for Ecological & Evolutionary Synthesis, University of Oslo, Blindernveien 31, 0371, Oslo, Norway
8Department of Biological Sciences, University of New Brunswick Saint John, 100 Tucker Park Road, E2K5E2, Saint John, Canada
9Tjärnö Marine Laboratory, University of Gothenburg, Hättebäcksvägen 7, Gothenburg, 45296, Sweden
10Centre for Coastal Research, University of Agder, Universitetsveien 25, 4630, Kristiansand, Norway
11Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, 91057, France
Alice Moussy
11Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, 91057, France
Corinne Cruaud
11Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, 91057, France
Karine Labadie
11Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, 91057, France
Emilie Téodori
12Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057 Evry, France
Lola Demirdjian
12Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057 Evry, France
Patrick Wincker
12Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057 Evry, France
Pedro H. Oliveira
12Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057 Evry, France
Jean-Marc Aury
12Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057 Evry, France
Tom Brown
13Leibniz Institute for Zoo and Wildlife Research, Alfred-Kowalke-Straße 17, 10315 Berlin, Germany
14Berlin Center for Genomics in Biodiversity Research (BeGenDiv), Koenigin-Luise-Str 6-8, 14195 Berlin, Germany

Abstract
The reference genome of Androsace saussurei (Ericales: Primulaceae: Primuloideae) provides a valuable resource for understanding the mechanisms of plant adaptations to the most extreme environments where flowering plants can thrive and the speciation mechanisms of plants dwelling on high alpine sky islands. The entirety of the genome sequence was assembled into 20 contiguous chromosomal pseudomolecules. This chromosome-level assembly encompasses 413 Mb, composed of 253 contigs and 101 scaffolds, with contig and scaffold N50 values of 4.95 Mb and 21.2 Mb, respectively.
Competing Interest Statement
The authors have declared no competing interest.
Copyright
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
Posted January 24, 2025.
ERGA-BGE genome of Androsace saussurei Dentant, Lavergne, F. C. Boucher & S. Ibanez, a recently described plant from the rooftops of Europe
Sébastien Lavergne, Alexy Rosa, Chuan Peng, Rita Monteiro, Astrid Böhne, Thomas Marcussen, Torsten Struck, Rebekah A. Oomen, Genoscope Sequencing Team, Alice Moussy, Corinne Cruaud, Karine Labadie, Emilie Téodori, Lola Demirdjian, Patrick Wincker, Pedro H. Oliveira, Jean-Marc Aury, Tom Brown
bioRxiv 2025.01.21.634019; doi: https://doi.org/10.1101/2025.01.21.634019
ERGA-BGE genome of Androsace saussurei Dentant, Lavergne, F. C. Boucher & S. Ibanez, a recently described plant from the rooftops of Europe
Sébastien Lavergne, Alexy Rosa, Chuan Peng, Rita Monteiro, Astrid Böhne, Thomas Marcussen, Torsten Struck, Rebekah A. Oomen, Genoscope Sequencing Team, Alice Moussy, Corinne Cruaud, Karine Labadie, Emilie Téodori, Lola Demirdjian, Patrick Wincker, Pedro H. Oliveira, Jean-Marc Aury, Tom Brown
bioRxiv 2025.01.21.634019; doi: https://doi.org/10.1101/2025.01.21.634019
Subject Area
Subject Areas
- Biochemistry (14117)
- Bioengineering (10780)
- Bioinformatics (34201)
- Biophysics (17603)
- Cancer Biology (14684)
- Cell Biology (20717)
- Clinical Trials (138)
- Developmental Biology (11152)
- Ecology (16459)
- Epidemiology (2067)
- Evolutionary Biology (20765)
- Genetics (13646)
- Genomics (19042)
- Immunology (14188)
- Microbiology (33062)
- Molecular Biology (13784)
- Neuroscience (72186)
- Paleontology (538)
- Pathology (2273)
- Pharmacology and Toxicology (3849)
- Physiology (6087)
- Plant Biology (12354)
- Synthetic Biology (3446)
- Systems Biology (8351)
- Zoology (1905)