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IMPPAT: A curated database of Indian Medicinal Plants, Phytochemistry And Therapeutics

Karthikeyan Mohanraj, Bagavathy Shanmugam Karthikeyan, R.P. Vivek-Ananth, R.P. Bharath Chand, S.R. Aparna, P. Mangalapandi, View ORCID ProfileAreejit Samal
doi: https://doi.org/10.1101/206995
Karthikeyan Mohanraj
1The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute, Chennai 600113, India
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Bagavathy Shanmugam Karthikeyan
1The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute, Chennai 600113, India
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R.P. Vivek-Ananth
1The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute, Chennai 600113, India
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R.P. Bharath Chand
1The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute, Chennai 600113, India
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S.R. Aparna
2Stella Maris College, Chennai 600086, India
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P. Mangalapandi
1The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute, Chennai 600113, India
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Areejit Samal
1The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute, Chennai 600113, India
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  • ORCID record for Areejit Samal
  • For correspondence: asamal@imsc.res.in
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Abstract

Phytochemical constituents of medicinal plants encompass a diverse space of chemical scaffolds which can be used for rational design of novel drugs. India is rich with a flora of indigenous medicinal plants that have been used for centuries in traditional Indian medicine to treat human maladies. A comprehensive online database on the phytochemistry of Indian medicinal plants will enable the application of systems biology and cheminformatic approaches towards natural product based drug discovery. In this direction, we here present, IMPPAT, a manually curated database of Indian Medicinal Plants, Phytochemistry, And Therapeutics. IMPPAT contains 1742 Indian medicinal plants, 9596 phytochemicals and 1124 therapeutic uses which span across 27074 plant-phytochemical associations and 11514 plant-therapeutic associations. Notably, the curation effort led to a non-redundant in silico chemical library of 9596 phytochemicals with standard chemical identifiers and structure information. Using cheminformatic approaches, we have computed the physicochemical properties and drug-likeliness of the phytochemicals in IMPPAT which led to a filtered subset of 960 potential druggable phytochemicals. Moreover, a comparative analysis against FDA approved drugs suggests that majority of the druggable phytochemicals in IMPPAT are good candidates for novel prospective drugs as they have little or no structural similarity with existing drugs. The IMPPAT database is openly accessible at: https://www.imsc.res.in/~asamal/resources/imppat/home.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted October 22, 2017.
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IMPPAT: A curated database of Indian Medicinal Plants, Phytochemistry And Therapeutics
Karthikeyan Mohanraj, Bagavathy Shanmugam Karthikeyan, R.P. Vivek-Ananth, R.P. Bharath Chand, S.R. Aparna, P. Mangalapandi, Areejit Samal
bioRxiv 206995; doi: https://doi.org/10.1101/206995
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IMPPAT: A curated database of Indian Medicinal Plants, Phytochemistry And Therapeutics
Karthikeyan Mohanraj, Bagavathy Shanmugam Karthikeyan, R.P. Vivek-Ananth, R.P. Bharath Chand, S.R. Aparna, P. Mangalapandi, Areejit Samal
bioRxiv 206995; doi: https://doi.org/10.1101/206995

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