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FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs

Chet Birger, Megan Hanna, Edward Salinas, Jason Neff, Gordon Saksena, Dimitri Livitz, Daniel Rosebrock, View ORCID ProfileChip Stewart, Ignaty Leshchiner, Alexander Baumann, Douglas Voet, Kristian Cibulskis, Eric Banks, Anthony Philippakis, Gad Getz
doi: https://doi.org/10.1101/209494
Chet Birger
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Megan Hanna
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Edward Salinas
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Jason Neff
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Gordon Saksena
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Dimitri Livitz
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Daniel Rosebrock
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Chip Stewart
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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  • ORCID record for Chip Stewart
Ignaty Leshchiner
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Alexander Baumann
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Douglas Voet
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Kristian Cibulskis
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Eric Banks
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
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Anthony Philippakis
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
2Brigham and Women’s Hospital, Department of Medicine, Divisions of Cardiology and Genetics, 75 Francis Street, Boston, Massachusetts 02115, USA
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Gad Getz
1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
3Massachusetts General Hospital Cancer Center and Department of Pathology, 55 Fruit Street, Boston, Massachusetts 02114, USA
4Harvard Medical School, 25 Shattuck Street, Boston, Massachusetts 02115, USA
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Article Information

doi 
https://doi.org/10.1101/209494
History 
  • November 3, 2017.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.

Author Information

  1. Chet Birger15,
  2. Megan Hanna15,
  3. Edward Salinas1,
  4. Jason Neff1,
  5. Gordon Saksena1,
  6. Dimitri Livitz1,
  7. Daniel Rosebrock1,
  8. Chip Stewart1,
  9. Ignaty Leshchiner1,
  10. Alexander Baumann1,
  11. Douglas Voet1,
  12. Kristian Cibulskis1,
  13. Eric Banks1,
  14. Anthony Philippakis1,2 and
  15. Gad Getz1,3,4
  1. 1Broad Institute of MIT and Harvard, 415 Main Street, Cambridge, Massachusetts 02142, USA
  2. 2Brigham and Women’s Hospital, Department of Medicine, Divisions of Cardiology and Genetics, 75 Francis Street, Boston, Massachusetts 02115, USA
  3. 3Massachusetts General Hospital Cancer Center and Department of Pathology, 55 Fruit Street, Boston, Massachusetts 02114, USA
  4. 4Harvard Medical School, 25 Shattuck Street, Boston, Massachusetts 02115, USA
  1. Correspondence and requests for materials should be addressed to Gad Getz, (gadgetz{at}broadinstitute.org).
  1. ↵5 These authors contributed equally to this work.

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Posted November 03, 2017.
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FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs
Chet Birger, Megan Hanna, Edward Salinas, Jason Neff, Gordon Saksena, Dimitri Livitz, Daniel Rosebrock, Chip Stewart, Ignaty Leshchiner, Alexander Baumann, Douglas Voet, Kristian Cibulskis, Eric Banks, Anthony Philippakis, Gad Getz
bioRxiv 209494; doi: https://doi.org/10.1101/209494
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FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs
Chet Birger, Megan Hanna, Edward Salinas, Jason Neff, Gordon Saksena, Dimitri Livitz, Daniel Rosebrock, Chip Stewart, Ignaty Leshchiner, Alexander Baumann, Douglas Voet, Kristian Cibulskis, Eric Banks, Anthony Philippakis, Gad Getz
bioRxiv 209494; doi: https://doi.org/10.1101/209494

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