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Processive movement of Actin by Biased Polymerization: A new paradigm of Axonal Transport

Nilaj Chakrabarty, Pankaj Dubey, Yong Tang, Archan Ganguly, Kelsey Ladt, Christophe Leterrier, Peter Jung, Subhojit Roy
doi: https://doi.org/10.1101/212449
Nilaj Chakrabarty
1Department of Physics and Astronomy, Neuroscience Program and Quantitative Biology Institute, Ohio University, Athens, OH, 45701
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Pankaj Dubey
2Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705
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Yong Tang
3Department of Molecular and Cellular Physiology, Stanford University school of Medicine, Stanford, CA 94305
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Archan Ganguly
4Department of Neurosciences, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093
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Kelsey Ladt
4Department of Neurosciences, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093
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Christophe Leterrier
5NeuroCyto, NICN UMR7259, Aix Marseille Université, CNRS, 13344 Cedex 15, Marseille, France
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Peter Jung
1Department of Physics and Astronomy, Neuroscience Program and Quantitative Biology Institute, Ohio University, Athens, OH, 45701
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  • For correspondence: roy27@wisc.edu jungp@ohio.edu
Subhojit Roy
2Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705
6Department of Neuroscience, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705
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  • For correspondence: roy27@wisc.edu jungp@ohio.edu
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ABSTRACT

Classic pulse-chase radiolabeling studies have shown that actin is conveyed via slow axonal transport, but the mechanistic basis for this movement is unknown. Using filamentous-actin probes and low-light imaging, we recently found that axonal actin was surprisingly dynamic, with focal assembly/dis-assembly events (actin “hotspots”) and polymers elongating along the long axis (actin “trails”). Although the relative frequency of anterograde actin trails was slightly higher, and axonal actin accumulated at presynaptic boutons, it’s unclear if – or how – the network of hotspots and trails can lead to processive actin transport. Using super-resolution imaging and barbed-end labeling assays, we found abundant actin nucleation along axon-shafts. Photoactivation/bleaching experiments reveal that actin has an overall, biased egress in axons. Starting with first principles of monomer/filament actin assembly, and incorporating imaging-data, we generated a robust model simulating axonal hotspots and trails. Our simulations predict that the axonal actin dynamics indeed lead to an anterogradely-biased flow of the actin population, at rates consistent with slow transport. Collectively, the data suggest that actin is conveyed in axons by an unusual mechanism involving local assembly and biased polymerization – kinetics that ultimately lead to slow transport. This unique transport mechanism seems well-suited to generate bulk transit of highly dynamic cytoskeletal cargoes.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 01, 2017.
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Processive movement of Actin by Biased Polymerization: A new paradigm of Axonal Transport
Nilaj Chakrabarty, Pankaj Dubey, Yong Tang, Archan Ganguly, Kelsey Ladt, Christophe Leterrier, Peter Jung, Subhojit Roy
bioRxiv 212449; doi: https://doi.org/10.1101/212449
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Processive movement of Actin by Biased Polymerization: A new paradigm of Axonal Transport
Nilaj Chakrabarty, Pankaj Dubey, Yong Tang, Archan Ganguly, Kelsey Ladt, Christophe Leterrier, Peter Jung, Subhojit Roy
bioRxiv 212449; doi: https://doi.org/10.1101/212449

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