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Processive movement of Actin by Biased Polymerization: A new paradigm of Axonal Transport

Nilaj Chakrabarty, Pankaj Dubey, Yong Tang, Archan Ganguly, Kelsey Ladt, Christophe Leterrier, Peter Jung, Subhojit Roy
doi: https://doi.org/10.1101/212449
Nilaj Chakrabarty
1Department of Physics and Astronomy, Neuroscience Program and Quantitative Biology Institute, Ohio University, Athens, OH, 45701
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Pankaj Dubey
2Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705
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Yong Tang
3Department of Molecular and Cellular Physiology, Stanford University school of Medicine, Stanford, CA 94305.
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Archan Ganguly
4Department of Neurosciences, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093
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Kelsey Ladt
4Department of Neurosciences, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093
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Christophe Leterrier
5NeuroCyto, NICN UMR7259, Aix Marseille Université, CNRS, 13344 Cedex 15, Marseille, France
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Peter Jung
1Department of Physics and Astronomy, Neuroscience Program and Quantitative Biology Institute, Ohio University, Athens, OH, 45701
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  • For correspondence: roy27@wisc.edu
Subhojit Roy
2Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705
6Department of Neuroscience, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, WI 53705
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  • For correspondence: roy27@wisc.edu
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ABSTRACT

Classic pulse-chase studies have shown that actin is conveyed in slow axonal transport, but the mechanistic basis for this movement is unknown. Recently, we reported that axonal actin was surprisingly dynamic, with focal assembly/dis-assembly events (“hotspots”) and elongating polymers along the axon-shaft (“trails”). Using a combination of live imaging, super-resolution microscopy, and modeling, here we explore how these axonal actin dynamics can lead to processive transport. We found abundant actin nucleation, along with a slow, anterogradely-biased flow of actin in axon-shafts. Starting with first principles of monomer/filament assembly – and incorporating imaging data – we generated a quantitative model simulating axonal hotspots and trails. Our simulations predict that the axonal actin dynamics indeed lead to an anterogradely-biased flow of the population, at rates consistent with slow transport. Collectively, the data point to a surprising scenario where local assembly and biased polymerization generate the slow axonal transport of actin. This mechanism is distinct from polymer-sliding, and seems well suited to convey highly dynamic cytoskeletal cargoes.

Acknowledgements This work was supported by an NIH grant to SR (R01NS075233). The authors thank Stephanie Gupton (UNC) for the Mena/Vasp constructs.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 09, 2017.
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Processive movement of Actin by Biased Polymerization: A new paradigm of Axonal Transport
Nilaj Chakrabarty, Pankaj Dubey, Yong Tang, Archan Ganguly, Kelsey Ladt, Christophe Leterrier, Peter Jung, Subhojit Roy
bioRxiv 212449; doi: https://doi.org/10.1101/212449
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Processive movement of Actin by Biased Polymerization: A new paradigm of Axonal Transport
Nilaj Chakrabarty, Pankaj Dubey, Yong Tang, Archan Ganguly, Kelsey Ladt, Christophe Leterrier, Peter Jung, Subhojit Roy
bioRxiv 212449; doi: https://doi.org/10.1101/212449

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