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Genomic, proteomic, and phylogenetic analysis of spounaviruses indicates paraphyly of the order Caudovirales

Jakub Barylski, François Enault, Bas E. Dutilh, Margo B.P. Schuller, Robert A. Edwards, Annika Gillis, Jochen Klumpp, Petar Knezevic, Mart Krupovic, Jens H. Kuhn, Rob Lavigne, Hanna M. Oksanen, Matthew B. Sullivan, Johannes Wittmann, Igor Tolstoy, J. Rodney Brister, Andrew M. Kropinski, View ORCID ProfileEvelien M Adriaenssens
doi: https://doi.org/10.1101/220434
Jakub Barylski
1Adam Mickiewicz University, Institute of Experimental Biology, Department of Molecular Virology, Poznań, Poland
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François Enault
2Université Clermont Auvergne, CNRS, LMGE, F-63000, Clermont Ferrand, France
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Bas E. Dutilh
3Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, Utrecht, The Netherlands
4Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, Utrecht, The Netherlands
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Margo B.P. Schuller
3Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, Utrecht, The Netherlands
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Robert A. Edwards
5Departments of Biology and Computer Science, San Diego State University, San Diego, CA, USA
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Annika Gillis
6Laboratory of Food and Environmental Microbiology, Université Catholique de Louvain, Louvain-la-Neuve, Belgium
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Jochen Klumpp
7Institute of Food, Nutrition and Health, ETH Zurich, Switzerland
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Petar Knezevic
8Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia
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Mart Krupovic
9Unit of Molecular Biology of the Gene in Extremophiles, Department of Microbiology, Institut Pasteur, paris, France
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Jens H. Kuhn
10Integrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Fort Detrick, Frederick, USA
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Rob Lavigne
11Laboratory of Gene Technology, KU Leuven, Belgium
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Hanna M. Oksanen
12Department of Biosciences, University of Helsinki, Helsinki, Finland; and Institute of Biotechnology, University of Helsinki, Helsinki, Finland
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Matthew B. Sullivan
13Departments of Microbiology and Civil, Environmental and Geodetic Engineering, The Ohio State University, Columbus, OH, USA
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Johannes Wittmann
14Leibniz-Institut DSMZ—Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Braunschweig, Germany
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Igor Tolstoy
15National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA
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J. Rodney Brister
15National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA
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Andrew M. Kropinski
16Departments of Food Science, Molecular and Cellular Biology; and Pathobiology, University of Guelph, Guelph, Ontario, Canada
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Evelien M Adriaenssens
17Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB, United Kingdom;
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  • ORCID record for Evelien M Adriaenssens
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Article Information

doi 
https://doi.org/10.1101/220434
History 
  • November 16, 2017.

Article Versions

  • You are currently viewing Version 1 of this article (November 16, 2017 - 10:15).
  • View Version 2, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Jakub Barylski1,
  2. François Enault2,
  3. Bas E. Dutilh3,4,
  4. Margo B.P. Schuller3,
  5. Robert A. Edwards5,
  6. Annika Gillis6,
  7. Jochen Klumpp7,
  8. Petar Knezevic8,
  9. Mart Krupovic9,
  10. Jens H. Kuhn10,
  11. Rob Lavigne11,
  12. Hanna M. Oksanen12,
  13. Matthew B. Sullivan13,
  14. Johannes Wittmann14,
  15. Igor Tolstoy15,
  16. J. Rodney Brister15,
  17. Andrew M. Kropinski16 and
  18. Evelien M Adriaenssens17,*
  1. 1Adam Mickiewicz University, Institute of Experimental Biology, Department of Molecular Virology, Poznań, Poland
  2. 2Université Clermont Auvergne, CNRS, LMGE, F-63000, Clermont Ferrand, France
  3. 3Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, Utrecht, The Netherlands
  4. 4Theoretical Biology and Bioinformatics, Department of Biology, Utrecht University, Utrecht, The Netherlands
  5. 5Departments of Biology and Computer Science, San Diego State University, San Diego, CA, USA
  6. 6Laboratory of Food and Environmental Microbiology, Université Catholique de Louvain, Louvain-la-Neuve, Belgium
  7. 7Institute of Food, Nutrition and Health, ETH Zurich, Switzerland
  8. 8Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia
  9. 9Unit of Molecular Biology of the Gene in Extremophiles, Department of Microbiology, Institut Pasteur, paris, France
  10. 10Integrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Fort Detrick, Frederick, USA
  11. 11Laboratory of Gene Technology, KU Leuven, Belgium
  12. 12Department of Biosciences, University of Helsinki, Helsinki, Finland; and Institute of Biotechnology, University of Helsinki, Helsinki, Finland
  13. 13Departments of Microbiology and Civil, Environmental and Geodetic Engineering, The Ohio State University, Columbus, OH, USA
  14. 14Leibniz-Institut DSMZ—Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Braunschweig, Germany
  15. 15National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA
  16. 16Departments of Food Science, Molecular and Cellular Biology; and Pathobiology, University of Guelph, Guelph, Ontario, Canada
  17. 17Institute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB, United Kingdom;
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Genomic, proteomic, and phylogenetic analysis of spounaviruses indicates paraphyly of the order Caudovirales
Jakub Barylski, François Enault, Bas E. Dutilh, Margo B.P. Schuller, Robert A. Edwards, Annika Gillis, Jochen Klumpp, Petar Knezevic, Mart Krupovic, Jens H. Kuhn, Rob Lavigne, Hanna M. Oksanen, Matthew B. Sullivan, Johannes Wittmann, Igor Tolstoy, J. Rodney Brister, Andrew M. Kropinski, Evelien M Adriaenssens
bioRxiv 220434; doi: https://doi.org/10.1101/220434
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Genomic, proteomic, and phylogenetic analysis of spounaviruses indicates paraphyly of the order Caudovirales
Jakub Barylski, François Enault, Bas E. Dutilh, Margo B.P. Schuller, Robert A. Edwards, Annika Gillis, Jochen Klumpp, Petar Knezevic, Mart Krupovic, Jens H. Kuhn, Rob Lavigne, Hanna M. Oksanen, Matthew B. Sullivan, Johannes Wittmann, Igor Tolstoy, J. Rodney Brister, Andrew M. Kropinski, Evelien M Adriaenssens
bioRxiv 220434; doi: https://doi.org/10.1101/220434

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