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Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data

Nicole M. Davis, Diana Proctor, View ORCID ProfileSusan P. Holmes, David A. Relman, Benjamin J. Callahan
doi: https://doi.org/10.1101/221499
Nicole M. Davis
1Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305
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Diana Proctor
2Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305
6Department of Orofacial Sciences, University of California, San Francisco School of Dentistry, San Francisco, CA 94143
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Susan P. Holmes
3Department of Statistics, Stanford University, Stanford, CA 94305
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  • ORCID record for Susan P. Holmes
David A. Relman
1Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305
2Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305
4Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, CA 94304
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Benjamin J. Callahan
5Department of Population Health and Pathobiology, College of Veterinary Medicine, North Carolina State University, Raleigh, NC 27607
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  • For correspondence: benjamin.j.callahan@gmail.com
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Posted November 17, 2017.
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Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
Nicole M. Davis, Diana Proctor, Susan P. Holmes, David A. Relman, Benjamin J. Callahan
bioRxiv 221499; doi: https://doi.org/10.1101/221499
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Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
Nicole M. Davis, Diana Proctor, Susan P. Holmes, David A. Relman, Benjamin J. Callahan
bioRxiv 221499; doi: https://doi.org/10.1101/221499

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