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Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
Nicole M. Davis, Diana M. Proctor, View ORCID ProfileSusan P. Holmes, David A. Relman, View ORCID ProfileBenjamin J. Callahan
doi: https://doi.org/10.1101/221499
Nicole M. Davis
1Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA
Diana M. Proctor
2Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA
3Department of Orofacial Sciences, University of California, San Francisco School of Dentistry, San Francisco, CA 94143, USA
Susan P. Holmes
4Department of Statistics, Stanford University, Stanford, CA 94305, USA
David A. Relman
1Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA
2Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA
5Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, CA 94304, USA
Benjamin J. Callahan
6Department of Population Health and Pathobiology, College of Veterinary Medicine, North Carolina State University, Raleigh, NC 27607, USA
7Bioinformatics Research Center, North Carolina State University, Raleigh, NC 27695, USA
Article usage
Posted July 25, 2018.
Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
Nicole M. Davis, Diana M. Proctor, Susan P. Holmes, David A. Relman, Benjamin J. Callahan
bioRxiv 221499; doi: https://doi.org/10.1101/221499
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