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Estimating the prevalence of missing experiments in a neuroimaging meta-analysis

Pantelis Samartsidis, Silvia Montagna, Angela R. Laird, Peter T. Fox, Timothy D. Johnson, Thomas E. Nichols
doi: https://doi.org/10.1101/225425
Pantelis Samartsidis
1MRC Biostatistics Unit, University of Cambridge
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  • For correspondence: pantelis.samartsidis@mrc-bsu.cam.ac.uk
Silvia Montagna
2Dipartimento di Scienze Economico-sociali e Matematico-statistiche (ESOMAS), University of Torino
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Angela R. Laird
3Department of Physics, Florida International University
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Peter T. Fox
4Research Imaging Institute, University of Texas at San Antonio
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Timothy D. Johnson
5Department of Biostatistics, University of Michigan
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Thomas E. Nichols
6Oxford Big Data Institute, University of Oxford
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Abstract

Coordinate-based meta-analyses (CBMA) allow researchers to combine the results from multiple fMRI experiments with the goal of obtaining results that are more likely to generalise. However, the interpretation of CBMA findings can be impaired by the file drawer problem, a type of publications bias that refers to experiments that are carried out but are not published. Using foci per contrast count data from the BrainMap database, we propose a zero-truncated modelling approach that allows us to estimate the prevalence of non-significant experiments. We validate our method with simulations and real coordinate data generated from the Human Connectome Project. Application of our method to the data from BrainMap provides evidence for the existence of a file drawer effect, with the rate of missing experiments estimated as at least 6 per 100 reported.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 19, 2019.
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Estimating the prevalence of missing experiments in a neuroimaging meta-analysis
Pantelis Samartsidis, Silvia Montagna, Angela R. Laird, Peter T. Fox, Timothy D. Johnson, Thomas E. Nichols
bioRxiv 225425; doi: https://doi.org/10.1101/225425
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Estimating the prevalence of missing experiments in a neuroimaging meta-analysis
Pantelis Samartsidis, Silvia Montagna, Angela R. Laird, Peter T. Fox, Timothy D. Johnson, Thomas E. Nichols
bioRxiv 225425; doi: https://doi.org/10.1101/225425

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