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Visual Representation of Experimental Protocols

James Scott-Brown, Antonis Papachristodoulou
doi: https://doi.org/10.1101/226852
James Scott-Brown
Department of Engineering Science, University of Oxford, Parks Road, Oxford, OX1 3PJ, UK
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Antonis Papachristodoulou
Department of Engineering Science, University of Oxford, Parks Road, Oxford, OX1 3PJ, UK
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Abstract

Using robots to automate laboratory tasks could increase throughput and reproducibility, but requires experimental protocols to be specified in a computer-readable format. We present a new user interface (Lists of Liquids) for specifying experimental protocols by directly manipulating a diagram: rather than having to specify individual liquid handling operations, the user can simply specify that particular lists of liquids should be combined as either a Cartesian product or convolution, and the system will plan a series of liquid handling steps to achieve this. This is intended to provide a higher-level interface in order to make the creation of protocols faster and less error prone.

Footnotes

  • E-mail: james.scott-brown{at}eng.ox.ac.uk

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted November 30, 2017.
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Visual Representation of Experimental Protocols
James Scott-Brown, Antonis Papachristodoulou
bioRxiv 226852; doi: https://doi.org/10.1101/226852
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Visual Representation of Experimental Protocols
James Scott-Brown, Antonis Papachristodoulou
bioRxiv 226852; doi: https://doi.org/10.1101/226852

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