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Euchromatic histone methyltransferases regulate peripheral heterochromatin tethering via histone and non-histone protein methylations

Alhad Ashok Ketkar, Radhika Arasala Rao, Neelam Kedia, Febina Ravindran, Vairavan Lakshmanan, Pankaj Kumar, Abhishek Mohanty, Shilpa Kumar, Sufi O. Raja, View ORCID ProfileAkash Gulyani, Chandraprakash Chaturvedi, Marjorie Brand, Dasaradhi Palakodeti, View ORCID ProfileShravanti Rampalli
doi: https://doi.org/10.1101/240952
Alhad Ashok Ketkar
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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Radhika Arasala Rao
Institute for Stem Cell Biology and Regenerative Medicine, SASTRA University;
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Neelam Kedia
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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Febina Ravindran
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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Vairavan Lakshmanan
Institute for Stem Cell Biology and Regenerative Medicine, SASTRA University;
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Pankaj Kumar
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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Abhishek Mohanty
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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Shilpa Kumar
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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Sufi O. Raja
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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Akash Gulyani
Institute for Stem Cell Biology and Regenerative Medicine (inStem);
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  • ORCID record for Akash Gulyani
Chandraprakash Chaturvedi
Sanjay Gandhi Postgraduate Institute of Medical Sciences;
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Marjorie Brand
Sprott Centre for Stem Cell Research;
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Dasaradhi Palakodeti
Institute For Stem Cell Biology and Regenerative Medicine (inStem)
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Shravanti Rampalli
Institute For Stem Cell Biology and Regenerative Medicine (inStem)
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  • ORCID record for Shravanti Rampalli
  • For correspondence: shravantird@instem.res.in
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Abstract

Euchromatic histone methyltransferases (EHMTs) methylate histone and non-histone proteins. Here we uncover a novel role for EHMTs in regulating heterochromatin anchorage to the nuclear periphery (NP) via non-histone methylations. In search for mechanism, we identified EHMTs methylate LaminB1 (LMNB1) that associates with the H3K9me2 marked peripheral heterochromatin. Loss of LMNB1 methylation or EHMTs abrogates the heterochromatin anchorage from the nuclear periphery. We further demonstrate that the loss of EHMTs induced many hallmarks of aging including global reduction of H3K27 methyl marks along with altered nuclear-morphology. Keeping consistent with this, we observed gradual depletion of EHMTs, which correlated with loss of methylated LMNB1 and peripheral heterochromatin in aging human fibroblasts. Restoration of EHMT expression reverts peripheral heterochromatin defect in aged cells. Collectively our studies elucidated a new mechanism by which EHMTs regulate heterochromatin domain organization and explains its impact on fundamental changes associated with the intrinsic aging process.

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Posted January 02, 2018.
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Euchromatic histone methyltransferases regulate peripheral heterochromatin tethering via histone and non-histone protein methylations
Alhad Ashok Ketkar, Radhika Arasala Rao, Neelam Kedia, Febina Ravindran, Vairavan Lakshmanan, Pankaj Kumar, Abhishek Mohanty, Shilpa Kumar, Sufi O. Raja, Akash Gulyani, Chandraprakash Chaturvedi, Marjorie Brand, Dasaradhi Palakodeti, Shravanti Rampalli
bioRxiv 240952; doi: https://doi.org/10.1101/240952
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Euchromatic histone methyltransferases regulate peripheral heterochromatin tethering via histone and non-histone protein methylations
Alhad Ashok Ketkar, Radhika Arasala Rao, Neelam Kedia, Febina Ravindran, Vairavan Lakshmanan, Pankaj Kumar, Abhishek Mohanty, Shilpa Kumar, Sufi O. Raja, Akash Gulyani, Chandraprakash Chaturvedi, Marjorie Brand, Dasaradhi Palakodeti, Shravanti Rampalli
bioRxiv 240952; doi: https://doi.org/10.1101/240952

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