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FAIRsharing: working with and for the community to describe and link data standards, repositories and policies

View ORCID ProfileSusanna-Assunta Sansone, View ORCID ProfilePeter McQuilton, View ORCID ProfilePhilippe Rocca-Serra, View ORCID ProfileAlejandra Gonzalez-Beltran, View ORCID ProfileMassimiliano Izzo, View ORCID ProfileAllyson Lister, View ORCID ProfileMilo Thurston, the FAIRsharing community
doi: https://doi.org/10.1101/245183
Susanna-Assunta Sansone
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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  • For correspondence: susanna-assunta.sansone@oerc.ox.ac.uk contact@fairsharing.org
Peter McQuilton
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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Philippe Rocca-Serra
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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Alejandra Gonzalez-Beltran
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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Massimiliano Izzo
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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Allyson Lister
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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Milo Thurston
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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  • ORCID record for Milo Thurston
Oxford e-Research Centre, Department of Engineering Science, University of Oxford, Oxford, OX1 3QG, UK.
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Abstract

Community-developed standards, such as those for the identification and reporting of data, underpin reproducible and reusable research. The number of community-driven efforts has been on the rise since the early 2000s, their uptake, however, is slow and uneven. Analyzing 70 journals and publishers data policies, we find that these recommend databases and repositories 37 times more often than standards. When a reporting standard is recommended by a publisher, it is more likely to be a minimal reporting guideline than a model, format or ontology even if the latter are the machine-readable standards that underpin the utility of databases and repositories. Here, we evaluate the standards landscape, focusing on those for reporting data and metadata, and their implementation by databases and repositories; we also propose key performance indicators, and highlight the importance of developing open linked data models that instantiate these community standards. Lastly, we launch a call to action highlighting the role producers and consumers of standards and repositories must play to maximize the visibility and adoption of these resources.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted January 17, 2018.
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FAIRsharing: working with and for the community to describe and link data standards, repositories and policies
Susanna-Assunta Sansone, Peter McQuilton, Philippe Rocca-Serra, Alejandra Gonzalez-Beltran, Massimiliano Izzo, Allyson Lister, Milo Thurston, the FAIRsharing community
bioRxiv 245183; doi: https://doi.org/10.1101/245183
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FAIRsharing: working with and for the community to describe and link data standards, repositories and policies
Susanna-Assunta Sansone, Peter McQuilton, Philippe Rocca-Serra, Alejandra Gonzalez-Beltran, Massimiliano Izzo, Allyson Lister, Milo Thurston, the FAIRsharing community
bioRxiv 245183; doi: https://doi.org/10.1101/245183

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