Forget Pixels: Adaptive Particle Representation of Fluorescence Microscopy Images

Bevan L. Cheeseman; Ulrik Günther; Mateusz Susik; Krzysztof Gonciarz; Ivo F. Sbalzarini

doi:10.1101/263061

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Forget Pixels: Adaptive Particle Representation of Fluorescence Microscopy Images

View ORCID ProfileBevan L. Cheeseman, View ORCID ProfileUlrik Günther, Mateusz Susik, View ORCID ProfileKrzysztof Gonciarz, View ORCID ProfileIvo F. Sbalzarini

doi: https://doi.org/10.1101/263061

Bevan L. Cheeseman

1Chair of Scientific Computing for Systems Biology, Faculty of Computer Science, TU Dresden, 01069 Dresden, Germany

2Center for Systems Biology Dresden, Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstr. 108, 01307 Dresden, Germany

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For correspondence: ivos@mpi-cbg.de cheesema@mpi-cbg.de

Ulrik Günther

1Chair of Scientific Computing for Systems Biology, Faculty of Computer Science, TU Dresden, 01069 Dresden, Germany

2Center for Systems Biology Dresden, Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstr. 108, 01307 Dresden, Germany

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Mateusz Susik

1Chair of Scientific Computing for Systems Biology, Faculty of Computer Science, TU Dresden, 01069 Dresden, Germany

2Center for Systems Biology Dresden, Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstr. 108, 01307 Dresden, Germany

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Krzysztof Gonciarz

1Chair of Scientific Computing for Systems Biology, Faculty of Computer Science, TU Dresden, 01069 Dresden, Germany

2Center for Systems Biology Dresden, Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstr. 108, 01307 Dresden, Germany

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ORCID record for Krzysztof Gonciarz

Ivo F. Sbalzarini

1Chair of Scientific Computing for Systems Biology, Faculty of Computer Science, TU Dresden, 01069 Dresden, Germany

2Center for Systems Biology Dresden, Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstr. 108, 01307 Dresden, Germany

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ORCID record for Ivo F. Sbalzarini
For correspondence: ivos@mpi-cbg.de cheesema@mpi-cbg.de

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Supplemental Video 3
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Supplemental Video 5

Supplemental Material
Supplemental Video 1 - Reconstruction
Supplemental Video 2 - Segmentation
Supplemental Video 3 - Raycasting on the APR
Supplemental Video 4 - Particle-based Rendering Example 1
Supplemental Video 4 - Particle-based Rendering Example 2

Supplementary Material
Supplementary Video 1 - Reconstruction
Supplementary Video 2 - Segmentation
Supplementary Video 3 - Raycasting on the APR
Supplementary Video 4 - Direct Particle Rendering
Supplementary Video 5 - Direct Particle Rendering

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Posted February 09, 2018.

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Forget Pixels: Adaptive Particle Representation of Fluorescence Microscopy Images

Bevan L. Cheeseman, Ulrik Günther, Mateusz Susik, Krzysztof Gonciarz, Ivo F. Sbalzarini

bioRxiv 263061; doi: https://doi.org/10.1101/263061

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Forget Pixels: Adaptive Particle Representation of Fluorescence Microscopy Images

Bevan L. Cheeseman, Ulrik Günther, Mateusz Susik, Krzysztof Gonciarz, Ivo F. Sbalzarini

bioRxiv 263061; doi: https://doi.org/10.1101/263061

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