Ordino: a visual analysis tool for ranking and exploring genes, cell lines, and tissue samples

Abstract

Ordino is a web-based analysis tool for cancer genomics that allows users to flexibly rank, filter, and explore genes, cell lines, and tissue samples based on pre-loaded data, including The Cancer Genome Atlas (TCGA) and the Cancer Cell Line Encyclopedia (CCLE), as well as manually uploaded information. A core component of Ordino is an interactive tabular data visualization that facilitates the user-driven prioritization process. Detail views of selected items complement the exploration. Findings can be stored, shared, and reproduced via the integrated session management. Availability and Implementation: Ordino is publicly available at https://ordino.caleydoapp.org. The source code is released at https://github.com/Caleydo/ordino.