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Sparse recurrent excitatory connectivity in the microcircuit of the adult mouse and human cortex

Stephanie C. Seeman, Luke Campagnola, Pasha A. Davoudian, Alex Hoggarth, Travis A. Hage, Alice Bosma-Moody, Christopher A. Baker, Jung Hoon Lee, Stefan Mihalas, Corinne Teeter, Andrew L. Ko, Jeffrey G. Ojemann, Ryder P. Gwinn, Daniel L. Silbergeld, Charles Cobbs, John Phillips, Ed Lein, Gabe J. Murphy, Christof Koch, Hongkui Zeng, Tim Jarsky
doi: https://doi.org/10.1101/292706
Stephanie C. Seeman
1Allen Institute for Brain Science, Seattle, WA
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Luke Campagnola
1Allen Institute for Brain Science, Seattle, WA
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Pasha A. Davoudian
1Allen Institute for Brain Science, Seattle, WA
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Alex Hoggarth
1Allen Institute for Brain Science, Seattle, WA
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Travis A. Hage
1Allen Institute for Brain Science, Seattle, WA
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Alice Bosma-Moody
1Allen Institute for Brain Science, Seattle, WA
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Christopher A. Baker
1Allen Institute for Brain Science, Seattle, WA
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Jung Hoon Lee
1Allen Institute for Brain Science, Seattle, WA
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Stefan Mihalas
1Allen Institute for Brain Science, Seattle, WA
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Corinne Teeter
1Allen Institute for Brain Science, Seattle, WA
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Andrew L. Ko
2Regional Epilepsy Center at Harborview Medical Center, Seattle, WA
3Department of Neurological Surgery, University of Washington School of Medicine, Seattle, WA
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Jeffrey G. Ojemann
2Regional Epilepsy Center at Harborview Medical Center, Seattle, WA
3Department of Neurological Surgery, University of Washington School of Medicine, Seattle, WA
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Ryder P. Gwinn
4Epilepsy Surgery and Functional Neurosurgery, Swedish Neuroscience Institute, Seattle, WA
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Daniel L. Silbergeld
3Department of Neurological Surgery, University of Washington School of Medicine, Seattle, WA
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Charles Cobbs
5The Ben and Catherine Ivy Center for Advanced Brain Tumor Treatment, Swedish Neuroscience Institute, Seattle, WA
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John Phillips
1Allen Institute for Brain Science, Seattle, WA
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Ed Lein
1Allen Institute for Brain Science, Seattle, WA
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Gabe J. Murphy
1Allen Institute for Brain Science, Seattle, WA
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Christof Koch
1Allen Institute for Brain Science, Seattle, WA
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Hongkui Zeng
1Allen Institute for Brain Science, Seattle, WA
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Tim Jarsky
1Allen Institute for Brain Science, Seattle, WA
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  • For correspondence: timi@alleninstitute.org
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Abstract

Generating a comprehensive description of cortical networks requires a large-scale, systematic approach. To that end, the Allen Institute is engaged in a pipeline project using multipatch electrophysiology, supplemented with 2-photon optogenetics, to characterize connectivity and synaptic signaling between classes of neurons in adult mouse and human cortex. We focus on producing results detailed enough for the generation of computational models and enabling comparison with future studies. Here we report our examination of intralaminar connectivity within each of several classes of excitatory neurons. We find that connections are sparse but present among all excitatory cell types and layers we sampled, with the most sparse connections in layers 5 and 6. Almost all mouse synapses exhibited short-term depression with similar dynamics. Synaptic signaling between a subset of layer 2/3 neurons; however, exhibited facilitation. These results contribute to a body of evidence describing recurrent excitatory connectivity as a conserved feature of cortical microcircuits.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted May 08, 2018.
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Sparse recurrent excitatory connectivity in the microcircuit of the adult mouse and human cortex
Stephanie C. Seeman, Luke Campagnola, Pasha A. Davoudian, Alex Hoggarth, Travis A. Hage, Alice Bosma-Moody, Christopher A. Baker, Jung Hoon Lee, Stefan Mihalas, Corinne Teeter, Andrew L. Ko, Jeffrey G. Ojemann, Ryder P. Gwinn, Daniel L. Silbergeld, Charles Cobbs, John Phillips, Ed Lein, Gabe J. Murphy, Christof Koch, Hongkui Zeng, Tim Jarsky
bioRxiv 292706; doi: https://doi.org/10.1101/292706
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Sparse recurrent excitatory connectivity in the microcircuit of the adult mouse and human cortex
Stephanie C. Seeman, Luke Campagnola, Pasha A. Davoudian, Alex Hoggarth, Travis A. Hage, Alice Bosma-Moody, Christopher A. Baker, Jung Hoon Lee, Stefan Mihalas, Corinne Teeter, Andrew L. Ko, Jeffrey G. Ojemann, Ryder P. Gwinn, Daniel L. Silbergeld, Charles Cobbs, John Phillips, Ed Lein, Gabe J. Murphy, Christof Koch, Hongkui Zeng, Tim Jarsky
bioRxiv 292706; doi: https://doi.org/10.1101/292706

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