Counting with DNA in metabarcoding studies: how should we convert sequence reads to dietary data?

Bruce E. Deagle; Austen C. Thomas; Julie C. McInnes; Laurence J. Clarket; Eero J. Vesterinen; Elizabeth L. Clare; Tyler R. Kartzinel; J. Paige Eveson

doi:10.1101/303461

New Results

Counting with DNA in metabarcoding studies: how should we convert sequence reads to dietary data?

Bruce E. Deagle, Austen C. Thomas, Julie C. McInnes, Laurence J. Clarket, Eero J. Vesterinen, Elizabeth L. Clare, Tyler R. Kartzinel, J. Paige Eveson

doi: https://doi.org/10.1101/303461

Bruce E. Deagle

*Australian Antarctic Division, Channel Highway, Kingston, Tasmania, Australia

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Austen C. Thomas

†Science Department, Smith-Root Inc., Vancouver, Washington, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Julie C. McInnes

*Australian Antarctic Division, Channel Highway, Kingston, Tasmania, Australia

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Laurence J. Clarket

‡Antarctic Climate & Ecosystems Cooperative Research Centre, University of Tasmania, Tasmania, Australia

*Australian Antarctic Division, Channel Highway, Kingston, Tasmania, Australia

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Eero J. Vesterinen

1Biodiversity Unit and Department of Biology, University of Turku, Turku, Finland

¶Department of Agricultural Sciences, University of Helsinki, Helsinki, Finland

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Elizabeth L. Clare

2School of Biological and Chemical Sciences, Queen Mary University of London, London, UK

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Tyler R. Kartzinel

3Department of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

J. Paige Eveson

§CSIRO Oceans and Atmosphere, GPO Box 1538, Hobart, Tasmania, Australia

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Abstract
Full Text
Info/History
Metrics
Supplementary material
Preview PDF

Supplemental Table 1
Supplemental Table 2
Supplementary Materials S3

View the discussion thread.

PreviousNext

Posted April 18, 2018.

Download PDF

Supplementary Material

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following Counting with DNA in metabarcoding studies: how should we convert sequence reads to dietary data?

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

Counting with DNA in metabarcoding studies: how should we convert sequence reads to dietary data?

Bruce E. Deagle, Austen C. Thomas, Julie C. McInnes, Laurence J. Clarket, Eero J. Vesterinen, Elizabeth L. Clare, Tyler R. Kartzinel, J. Paige Eveson

bioRxiv 303461; doi: https://doi.org/10.1101/303461

Share This Article:

Citation Tools

Counting with DNA in metabarcoding studies: how should we convert sequence reads to dietary data?

Bruce E. Deagle, Austen C. Thomas, Julie C. McInnes, Laurence J. Clarket, Eero J. Vesterinen, Elizabeth L. Clare, Tyler R. Kartzinel, J. Paige Eveson

bioRxiv 303461; doi: https://doi.org/10.1101/303461

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Ecology

Subject Areas

All Articles

Animal Behavior and Cognition (5716)
Biochemistry (12968)
Bioengineering (9845)
Bioinformatics (31589)
Biophysics (16282)
Cancer Biology (13359)
Cell Biology (19043)
Clinical Trials (138)
Developmental Biology (10320)
Ecology (15331)
Epidemiology (2067)
Evolutionary Biology (19577)
Genetics (12985)
Genomics (17954)
Immunology (13069)
Microbiology (30553)
Molecular Biology (12740)
Neuroscience (66683)
Paleontology (490)
Pathology (2065)
Pharmacology and Toxicology (3551)
Physiology (5538)
Plant Biology (11418)
Scientific Communication and Education (1753)
Synthetic Biology (3177)
Systems Biology (7839)
Zoology (1769)