New Results
High-resolution sweep metagenomics using ultrafast read mapping and inference
View ORCID ProfileTommi Mäklin, View ORCID ProfileTeemu Kallonen, Sophia David, View ORCID ProfileBen Pascoe, View ORCID ProfileGuillaume Méric, David M. Aanensen, Edward J. Feil, View ORCID ProfileSamuel K. Sheppard, View ORCID ProfileJukka Corander, View ORCID ProfileAntti Honkela
doi: https://doi.org/10.1101/332544
Tommi Mäklin
1Helsinki Institute for Information Technology, Department of Mathematics and Statistics, University of Helsinki, Finland
Teemu Kallonen
2Department of Biostatistics, University of Oslo, Norway
3Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom
Sophia David
4Centre for Genomic Pathogen Surveillance, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom
Ben Pascoe
5The Milner Center for Evolution, Department of Biology and Biochemistry, Bath University, Bath, United Kingdom
Guillaume Méric
5The Milner Center for Evolution, Department of Biology and Biochemistry, Bath University, Bath, United Kingdom
David M. Aanensen
3Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom
6Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
7Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom
Edward J. Feil
5The Milner Center for Evolution, Department of Biology and Biochemistry, Bath University, Bath, United Kingdom
Samuel K. Sheppard
5The Milner Center for Evolution, Department of Biology and Biochemistry, Bath University, Bath, United Kingdom
Jukka Corander
1Helsinki Institute for Information Technology, Department of Mathematics and Statistics, University of Helsinki, Finland
2Department of Biostatistics, University of Oslo, Norway
3Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom
Antti Honkela
1Helsinki Institute for Information Technology, Department of Mathematics and Statistics, University of Helsinki, Finland
8Department of Public Health, University of Helsinki, Finland
Posted June 05, 2018.
High-resolution sweep metagenomics using ultrafast read mapping and inference
Tommi Mäklin, Teemu Kallonen, Sophia David, Ben Pascoe, Guillaume Méric, David M. Aanensen, Edward J. Feil, Samuel K. Sheppard, Jukka Corander, Antti Honkela
bioRxiv 332544; doi: https://doi.org/10.1101/332544
Subject Area
Subject Areas
- Biochemistry (11753)
- Bioengineering (8752)
- Bioinformatics (29201)
- Biophysics (14974)
- Cancer Biology (12100)
- Cell Biology (17413)
- Clinical Trials (138)
- Developmental Biology (9422)
- Ecology (14182)
- Epidemiology (2067)
- Evolutionary Biology (18309)
- Genetics (12245)
- Genomics (16804)
- Immunology (11869)
- Microbiology (28098)
- Molecular Biology (11596)
- Neuroscience (60975)
- Paleontology (451)
- Pathology (1871)
- Pharmacology and Toxicology (3238)
- Physiology (4959)
- Plant Biology (10427)
- Synthetic Biology (2886)
- Systems Biology (7340)
- Zoology (1651)