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History
- July 10, 2019.
Article Versions
- Version 1 (June 5, 2018 - 08:47).
- You are viewing Version 2, the most recent version of this article.
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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
Author Information
- Tommi Mäklin1,
- Teemu Kallonen2,3,
- Sophia David4,
- Christine J. Boinett5,6,
- Ben Pascoe7,
- Guillaume Méric7,
- David M. Aanensen3,8,9,
- Edward J. Feil7,
- Stephen Baker5,6,
- Julian Parkhill3,
- Samuel K. Sheppard7,
- Jukka Corander1,2,3 and
- Antti Honkela1,10,11,*
- 1Helsinki Institute for Information Technology HIIT, Department of Mathematics and Statistics, University of Helsinki, Finland
- 2Department of Biostatistics, University of Oslo, Norway
- 3Wellcome Sanger Institute, Hinxton, Cambridge, United Kingdom
- 4Centre for Genomic Pathogen Surveillance, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom
- 5Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam
- 6Centre for Tropical Medicine and Global Health, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, United Kingdom
- 7The Milner Centre for Evolution, Department of Biology and Biochemistry, Bath University, Bath, United Kingdom
- 8Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
- 9Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom
- 10Department of Public Health, University of Helsinki, Finland
- 11Helsinki Institute for Information Technology HIIT, Department of Computer Science, University of Helsinki, Finland
- ↵*Corresponding author email: antti.honkela{at}helsinki.fi