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Live Mouse Tracker: real-time behavioral analysis of groups of mice

Fabrice de Chaumont, Elodie Ey, Nicolas Torquet, Thibault Lagache, Stéphane Dallongeville, Albane Imbert, Thierry Legou, Anne-Marie Le Sourd, Philippe Faure, Thomas Bourgeron, Jean-Christophe Olivo-Marin
doi: https://doi.org/10.1101/345132
Fabrice de Chaumont
2Institut Pasteur, BioImage Analysis Unit. CNRS UMR 3691, Paris, France.
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  • For correspondence: fabrice.de-chaumont@pasteur.fr elodie.ey@pasteur.fr jean-christophe.olivo-marin@pasteur.fr
Elodie Ey
3CNRS UMR 3571 Genes, Synapses and Cognition, Institut Pasteur, Paris, France.
4Université Paris Diderot, Sorbonne Paris Cité, Human Genetics and Cognitive Functions, Paris, France.
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  • For correspondence: fabrice.de-chaumont@pasteur.fr elodie.ey@pasteur.fr jean-christophe.olivo-marin@pasteur.fr
Nicolas Torquet
5Sorbonne Université, CNRS UMR 8246, INSERM, Neurosciences Paris Seine - Institut de Biologie Paris-Seine (NPS - IBPS), 75005, Paris, France.
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Thibault Lagache
2Institut Pasteur, BioImage Analysis Unit. CNRS UMR 3691, Paris, France.
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Stéphane Dallongeville
2Institut Pasteur, BioImage Analysis Unit. CNRS UMR 3691, Paris, France.
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Albane Imbert
6Institut Pasteur, FabLab, Center for innovation and technological research (Citech), Paris, France.
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Thierry Legou
7Aix-Marseille Université, CNRS, LPL, UMR 7309, 13100 Aix-en-Provence, France.
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Anne-Marie Le Sourd
3CNRS UMR 3571 Genes, Synapses and Cognition, Institut Pasteur, Paris, France.
4Université Paris Diderot, Sorbonne Paris Cité, Human Genetics and Cognitive Functions, Paris, France.
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Philippe Faure
5Sorbonne Université, CNRS UMR 8246, INSERM, Neurosciences Paris Seine - Institut de Biologie Paris-Seine (NPS - IBPS), 75005, Paris, France.
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Thomas Bourgeron
3CNRS UMR 3571 Genes, Synapses and Cognition, Institut Pasteur, Paris, France.
4Université Paris Diderot, Sorbonne Paris Cité, Human Genetics and Cognitive Functions, Paris, France.
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Jean-Christophe Olivo-Marin
2Institut Pasteur, BioImage Analysis Unit. CNRS UMR 3691, Paris, France.
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  • For correspondence: fabrice.de-chaumont@pasteur.fr elodie.ey@pasteur.fr jean-christophe.olivo-marin@pasteur.fr
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Abstract

Preclinical studies of psychiatric disorders require the use of animal models to investigate the impact of environmental factors or genetic mutations on complex traits such as decision-making and social interactions. Here, we present a real-time method for behavior analysis of mice housed in groups that couples computer vision, machine learning and Triggered-RFID identification to track and monitor animals over several days in enriched environments. The system extracts a thorough list of individual and collective behavioral traits and provides a unique phenotypic profile for each animal. On mouse models, we study the impact of mutations of genes Shank2 and Shank3 involved in autism. Characterization and integration of data from behavioral profiles of mutated female mice reveals distinctive activity levels and involvement in complex social configuration.

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  • ↵8 These authors jointly directed this work.

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Posted June 18, 2018.
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Live Mouse Tracker: real-time behavioral analysis of groups of mice
Fabrice de Chaumont, Elodie Ey, Nicolas Torquet, Thibault Lagache, Stéphane Dallongeville, Albane Imbert, Thierry Legou, Anne-Marie Le Sourd, Philippe Faure, Thomas Bourgeron, Jean-Christophe Olivo-Marin
bioRxiv 345132; doi: https://doi.org/10.1101/345132
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Live Mouse Tracker: real-time behavioral analysis of groups of mice
Fabrice de Chaumont, Elodie Ey, Nicolas Torquet, Thibault Lagache, Stéphane Dallongeville, Albane Imbert, Thierry Legou, Anne-Marie Le Sourd, Philippe Faure, Thomas Bourgeron, Jean-Christophe Olivo-Marin
bioRxiv 345132; doi: https://doi.org/10.1101/345132

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