CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato; Koki Tsuyuzaki; Kentaro Shimizu; Itoshi Nikaido

doi:10.1101/374462

New Results

CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido

doi: https://doi.org/10.1101/374462

Kenta Sato

1Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, 113-8657, Tokyo, Japan

2Laboratory for Bioinformatics Research RIKEN Center for Biosystems Dynamics Research, Wako, 351-0198, Saitama, Japan

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
For correspondence: bicycle1885@gmail.com

Koki Tsuyuzaki

2Laboratory for Bioinformatics Research RIKEN Center for Biosystems Dynamics Research, Wako, 351-0198, Saitama, Japan

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Kentaro Shimizu

1Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, 113-8657, Tokyo, Japan

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Itoshi Nikaido

2Laboratory for Bioinformatics Research RIKEN Center for Biosystems Dynamics Research, Wako, 351-0198, Saitama, Japan

3Bioinformatics Course, Master’s/Doctoral Program in Life Science Innovation (T-LSI), School of Integrative and Global Majors (SIGMA), University of Tsukuba, Wako, 351-0198, Saitama, Japan

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Abstract
Full Text
Info/History
Metrics
Supplementary material
Preview PDF

Additional file 1
Additional file 2
Additional file 3

View the discussion thread.

PreviousNext

Posted July 25, 2018.

Download PDF

Supplementary Material

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido

bioRxiv 374462; doi: https://doi.org/10.1101/374462

Share This Article:

Citation Tools

CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido

bioRxiv 374462; doi: https://doi.org/10.1101/374462

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Bioinformatics

Subject Areas

All Articles

Animal Behavior and Cognition (3603)
Biochemistry (7570)
Bioengineering (5526)
Bioinformatics (20798)
Biophysics (10329)
Cancer Biology (7985)
Cell Biology (11640)
Clinical Trials (138)
Developmental Biology (6606)
Ecology (10205)
Epidemiology (2065)
Evolutionary Biology (13620)
Genetics (9542)
Genomics (12847)
Immunology (7921)
Microbiology (19543)
Molecular Biology (7660)
Neuroscience (42113)
Paleontology (308)
Pathology (1258)
Pharmacology and Toxicology (2202)
Physiology (3267)
Plant Biology (7042)
Scientific Communication and Education (1294)
Synthetic Biology (1951)
Systems Biology (5426)
Zoology (1117)