CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato; Koki Tsuyuzaki; Kentaro Shimizu; Itoshi Nikaido

doi:10.1101/374462

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CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido

doi: https://doi.org/10.1101/374462

Kenta Sato

1Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, 113-8657, Tokyo, Japan

2Laboratory for Bioinformatics Research RIKEN Center for Biosystems Dynamics Research, Wako, 351-0198, Saitama, Japan

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For correspondence: bicycle1885@gmail.com

Koki Tsuyuzaki

2Laboratory for Bioinformatics Research RIKEN Center for Biosystems Dynamics Research, Wako, 351-0198, Saitama, Japan

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Kentaro Shimizu

1Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, 113-8657, Tokyo, Japan

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Itoshi Nikaido

2Laboratory for Bioinformatics Research RIKEN Center for Biosystems Dynamics Research, Wako, 351-0198, Saitama, Japan

3Bioinformatics Course, Master’s/Doctoral Program in Life Science Innovation (T-LSI), School of Integrative and Global Majors (SIGMA), University of Tsukuba, Wako, 351-0198, Saitama, Japan

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Posted July 25, 2018.

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CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido

bioRxiv 374462; doi: https://doi.org/10.1101/374462

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CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

Kenta Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido

bioRxiv 374462; doi: https://doi.org/10.1101/374462

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